Eupeodes corollae: 129938694
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Entry
129938694 CDS
T09463
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03013
Nucleocytoplasmic transport
ecoe03015
mRNA surveillance pathway
ecoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129938694
09122 Translation
03013 Nucleocytoplasmic transport
129938694
03015 mRNA surveillance pathway
129938694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecoe03019
]
129938694
Messenger RNA biogenesis [BR:
ecoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129938694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
129938694
NCBI-ProteinID:
XP_055902362
LinkDB
All DBs
Position
1:240046932..240062955
Genome browser
AA seq
995 aa
AA seq
DB search
MAEVANLPSQAPPAPPSSEHSAASLVAAASATATATIPADIPNENLKNEVNDLSSTAQLG
TSPNQEKSSNSHHHDSEYDTASDLEGGTHDDYEDDDDNDEEGDEEDDDDDDDSVEEVGNS
DTDSVEFDAERQRGDGQEQADYTKKVDEDRSNPQYIPKKGTFYEHDDRTADEPEGQPSQD
KAETTEVGGENKSTSPTTISQASKTMKKWQPASGVDRWSHDRFVAGEQAPKSRTELVSAY
GYDIRDEDGPPRARRRRRYARGPSKYSRNWEDETAYIKASNAQRKPPRPEDFPALEERQK
ARKSRSYRDEKENRFDRPQTDRNRIAAAAGGGGGGGVQQIPNRGENKEPIRRSTGNTKHV
RPGGRQHGMEFKNKNRSHTGHMNSNRGSNNIDRDGVNITRSIVNNQAVDQSSIVESSNFQ
KTSSNTNNKGINMQQTVKVVNQQSYNGYEQQQGQAVHKSQQQINNASGSGYNSRDVNEKF
TNNHSTQSPRPVTTPSSNLSARLQQAQNRNDPSHVGSVQMHTLANQHSPQVPNQNAMQNN
IVDIQHQQQQQQQMQQVVNQQEQARSKRYSSLRQRTQHETAGPVPSNPHLDQHTLQQLQM
QHEAQQQQQQQHQQITSNVHPPPQQLIMQEQQLLQANLMQLYHQENLQAQMQALQVSSLP
PAAAPQPPTAAKQPYATIPQQYAAGTSGPPAATYYTPSTPDYSSPPPAAVPSQQLQYTQP
PAAFLQSQTAAAPLAFNPTATQQPLSQNAMAPPIAASTPAQVPPGSVSYVQAAPPNPSTA
PSTSYPNYTNYTPNFNTVGGTTYFVPTPQPTARPPVLPQRRPTNAIPILPPSEKKRTADN
KQQQQDEDSKTNSSTSTAASANAPIGSAENIDHILDNMFVQRAPYQPQTRKSASPPSDDP
SKGSNTSAAAVGAAAGAADPSSVGKSRTHESSSNASQLDNESSSAAAAASKQLSAVPDAN
TQNMVVNNSESGAGVVLATAGESTIGKQSAIVPPQ
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagttgctaatttgccatcacaggcgccaccagctcctccatcatcggagcac
tctgcggcttcgcttgtagctgctgcctctgctactgctactgctacgattcctgctgat
ataccaaatgaaaatcttaaaaatgaggtaaatgatttatcttcaactgctcagctggga
acatcgccgaatcaggaaaaatcaagtaattctcatcatcatgattctgagtatgacaca
gctagtgacctcgaaggtggcactcatgacgactatgaagacgatgatgataacgatgaa
gaaggcgacgaagaagatgatgatgacgatgatgatagtgttgaagaagtcggaaatagt
gacacggatagtgttgaatttgatgctgaaagacaacgtggcgatgggcaggaacaagct
gattatactaagaaagtagatgaagatcgaagcaatccacaatatatacctaagaaggga
actttctacgagcacgatgatcgtactgctgatgaaccggaaggtcaaccgtctcaagac
aaagctgagacaactgaagttggaggagaaaataagtcaacttcgccgacaacaatttct
caggcttcaaaaactatgaaaaaatggcaaccagcatctggagtggatcgttggtctcat
gatcgttttgttgctggcgaacaagcacccaaatcgcgaacagaacttgtgtctgcatac
ggctatgacatcagagatgaggatggtccgccaagagcgcgcagacgtcgccgatatgct
cgcggtccaagtaaatactcgcgaaattgggaagacgaaacagcctacattaaggctagc
aatgcccaaagaaaaccaccgcgtcctgaagactttccagccctggaagaaaggcaaaaa
gcccgcaagtcgcgaagctatcgtgatgaaaaggagaatcgtttcgatcggccacaaact
gatcgaaatcgtattgcagcagcagctggcggcggtggcggaggtggtgtacaacaaatc
cccaacagaggagagaacaaagaaccaattagacgcagcacgggcaacacgaaacatgtt
cgtcccggcggcagacaacacggtatggaattcaagaacaaaaatcgctcccacactggc
catatgaattcaaatcgaggaagcaataacatcgacagagatggtgtcaatataacgcgt
tcaattgttaataaccaagctgttgaccaatcgtccattgtagaatcatcgaatttccaa
aagacatcttcgaatacaaataacaaaggcataaatatgcaacaaacagtcaaggtagta
aatcaacagtcatataatggctatgagcagcagcaaggccaagccgtgcacaagtctcaa
caacaaatcaataatgctagtggcagtggatataattcacgagatgtaaacgagaagttc
acaaacaatcacagcactcagagccctcggccggtgacaactccaagttcgaatttgtct
gctcgtttgcaacaggcgcagaatcgcaacgatcccagccatgttggcagcgtccagatg
catacattggccaatcaacacagtccacaagttccaaatcagaatgctatgcaaaacaac
atagttgacattcaacaccagcagcagcagcaacaacagatgcagcaggttgtcaatcag
caagaacaagcgcgatcaaagagatattccagcttaagacagaggacacaacatgagact
gccggacccgtgcctagtaatccacacttagatcaacatactcttcagcagttgcagatg
caacacgaagcacagcagcaacagcagcagcaacaccaacagataacatcgaacgtccac
ccaccaccacagcagttgataatgcaggagcagcaattgctgcaggctaacttgatgcag
ctttatcatcaggagaatcttcaggcccagatgcaggctctgcaagtgtccagcttgccg
ccagctgcagccccgcagccaccaactgctgcaaaacagccttacgcaacaataccacag
caatacgctgctggaacttctgggccaccggcagcgacctactacacaccatccacgccc
gattacagctcgccaccgcctgcagctgtgcctagccaacaactacagtacacacagcca
ccggctgcattcctgcagtcgcagaccgcagcggctccacttgcctttaatccgaccgca
acgcagcagcctctcagccagaacgcaatggcacctcccatagccgcttcaaccccagct
caggtaccaccaggcagtgttagttatgttcaggcggctcccccgaatccatcgacagca
ccctccacttcttatcccaactacaccaattacacccccaacttcaacacggttgggggc
acaacatatttcgttcctacaccgcagccgactgctcgtccaccagtactgcctcaaaga
agacccacaaacgctataccaattctaccgccatccgaaaagaaacgtaccgcagataac
aagcagcagcagcaagatgaagactcaaagaccaacagttccacttcaacggcagcgtca
gccaatgctcccattggcagtgccgagaacatcgatcacattttggacaacatgtttgta
cagcgagcgccataccaacctcaaactcgcaagagtgcttctccacccagtgacgatccg
agcaagggctccaacacctcggcagcagctgtaggcgcagcagcaggtgcagccgatccg
tcctctgttggtaaatcccggacacacgaatcatcttctaatgcatctcagttggacaat
gaatcgtcatcagctgcagcggcagcttctaagcagttgtcagcagtgccagatgccaat
actcagaatatggttgtaaacaattccgaatctggtgctggcgtcgtcctcgccaccgcc
ggtgaatctactattggaaagcagtcagccattgttccgccgcagtag
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