Eupeodes corollae: 129939396
Help
Entry
129939396 CDS
T09463
Name
(RefSeq) ATP-dependent RNA helicase DHX15 homolog
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129939396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecoe03041
]
129939396
03009 Ribosome biogenesis [BR:
ecoe03009
]
129939396
Enzymes [BR:
ecoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129939396
Spliceosome [BR:
ecoe03041
]
Complex A
U2 snRNP components
U2 related factors
129939396
Complex B
129939396
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
129939396
Ribosome biogenesis [BR:
ecoe03009
]
Eukaryotic type
90S particles
Helicases
129939396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
Flavi_DEAD
AAA_19
ResIII
nSTAND3
SRP54
AAA_25
AAA_7
AAA_30
HTH_IclR
Motif
Other DBs
NCBI-GeneID:
129939396
NCBI-ProteinID:
XP_055903366
EnsemblRapid:
ENSEEAG00000012012
LinkDB
All DBs
Position
1:complement(237967817..237979656)
Genome browser
AA seq
727 aa
AA seq
DB search
MSKRRIEVGETYPKPRKITTPPSDGTVATATTTAGGSGALPMAKQMSTMNPYTNKPYSQR
YSNLFKKRITLPVFEYQVDFMRLLNDHQSIVLVGETGSGKTTQIPQWCVEFALSRGGKAV
ACTQPRRVAAMSVAQRVSEEMDVVLGEQVGYSIRFEDCSSQKTLLKYMTDGMLLREAMSD
PMLESYQVILLDEAHERTLATDILMGVLKEVIRQRKDLKLVVMSATLDAGKFQQYFDNAP
LMSVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHLCEDIEGDILMFLTGQEEIEEACKR
IKRDADNLGPEVGELKCIPLYSTLPPNMQQRIFEPAPPNKANGAIGRKVVVSTNIAETSL
TIDGVVFVIDPGFAKQKVYNPRIRLESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEK
AFNNEMQDNTYAEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAA
LDDDGNLTELGAIMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAKK
AADEAKMRFAHIDGDHLTLLNVYHAFKQSNEDPNWCYENFINFRSLKSADNVRHQLARIM
DRFSLKRTSTEFTSKDYYINIRKALVQGFFMQVAHLERTGQYLTIKDNQIVQLHPSTCLD
HKPDWVIYNEFVLTTKNYIRTVTDVKPEWLLSHAPQYYDMNNFPQCEAKRQLELLQTRLD
SKQYQKF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgaagaattgaagttggcgaaacttatccaaagccaagaaaaataacaacc
ccgccatcagatggaactgttgctacagcaacaacaactgcaggtggaagcggtgcttta
ccgatggccaaacaaatgtccacaatgaatccctacaccaacaaaccctattcgcagcgg
tattcaaatctcttcaagaagaggatcactttgcccgttttcgaataccaagtggatttc
atgaggctgctcaatgatcatcagtcgattgtgctggttggtgagactggttcgggaaaa
actacacagatcccacagtggtgtgtcgagtttgcgctgtcgagaggtggcaaagctgtt
gcttgtacacaaccacgtcgagtggctgcgatgtcggtggcacaacgtgtgtccgaggaa
atggacgttgtgctgggggagcaagtgggttatagtattcgtttcgaggattgctcgtcg
cagaaaacactgctcaagtacatgacagacggtatgttgctgcgtgaggcaatgtctgat
ccgatgttggaatcttaccaagttattctgctcgatgaggctcacgaaaggacactagcc
actgatattctgatgggagttctcaaggaagtcattcgacaaagaaaggatctaaagctt
gtggtcatgtctgccacattggatgccggcaaatttcaacagtactttgacaatgctcct
ctaatgagtgtacctggtcgtacgcatcctgtcgaaatcttctatacaccagaaccagaa
agagattatcttgaagctgcaattcgaaccgtgatacaaattcatctttgcgaagacata
gaaggtgacattctgatgttcctcacaggtcaggaggaaatcgaagaggcatgcaaaaga
atcaaacgagatgccgacaatcttggacctgaagttggtgaattgaaatgcattccgttg
tactcgacgttgccaccaaatatgcaacagagaattttcgaaccagcaccgccaaataag
gccaatggagccatcgggcgaaaagtcgtcgtatcgaccaacatcgctgaaacctctcta
accattgatggtgttgtctttgtgattgatcctggttttgccaaacaaaaggtctataat
ccacgtattcgattggagagtttgctggtttcaccaattagtaaagcttcggcacaacag
agagccggtcgtgctggtcgtacaagaccgggtaaatgtttcaggctgtacaccgagaag
gcatttaataatgaaatgcaggacaatacttatgctgaaattttaagatctaatttagga
actgttgttcttcaattgaaaaaacttggaatcgatgatttggttcattttgattttatg
gatccaccagcaccggagacactgatgcgtgccctggaattgctcaattatttagctgct
ttagatgacgatggaaatttgacggaattgggagcgattatgtctgagttcccgctagat
ccacaattggcaaaaatgttgatagcaagttgtcagcataattgctcaaatgagatccta
tctataacagccatgttgtcggtccctcagtgtttcgttcgaccaaatgaggccaaaaag
gcagctgacgaggcaaaaatgcgtttcgcccatatcgatggagatcatttaacattattg
aatgtctatcatgcttttaaacaaagtaacgaagatccaaactggtgctatgagaacttc
atcaatttccgttcattgaaatccgctgacaatgtacgccaccaattagccagaatcatg
gatcgtttcagtttaaaacgcaccagcacagagttcacgtcgaaagattattacattaat
attcgaaaggcactggtgcagggattctttatgcaagtagcgcacttagaaagaaccgga
caatatcttacgataaaagataatcaaattgtgcagttgcatccgtcgacgtgtttggac
cataaacccgattgggttatctacaatgagtttgtgttgactacgaaaaattatattcga
actgtcaccgatgttaaacctgaatggttattgtcacacgccccacaatattacgacatg
aacaacttcccacaatgcgaagcgaaaagacaacttgaattgctgcaaactcgattagat
tctaaacagtaccagaagttttaa
DBGET
integrated database retrieval system
