KEGG   Eupeodes corollae: 129939577
Entry
129939577         CDS       T09463                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
ecoe  Eupeodes corollae
Pathway
ecoe03013  Nucleocytoplasmic transport
ecoe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecoe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129939577
  09122 Translation
   03013 Nucleocytoplasmic transport
    129939577
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecoe03019]
    129939577
   03041 Spliceosome [BR:ecoe03041]
    129939577
Messenger RNA biogenesis [BR:ecoe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     129939577
Spliceosome [BR:ecoe03041]
 Complex C
  Other components
   EJC/TREX
    129939577
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    129939577
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_EML eIF2A Beta-prop_NOL10_N Beta-prop_HPS5 Tricorn_2nd RMC1_N Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st NBCH_WD40 WDR90_beta-prop_4th DSE1_N Beta-prop_EIPR1 TRM82_WD PD40 Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 PAC11 Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_ELP1_1st Beta-prop_WDR75_1st Peptidase_S9_N DPPIV_N baeRF_family5
Other DBs
NCBI-GeneID: 129939577
NCBI-ProteinID: XP_055903616
LinkDB
Position
1:complement(99094835..99096257)
AA seq 321 aa
MSRKNATIEELQTYFKTHSKIKEQKAHTSKVHSVGWSCDGKRLASGSFDKTVAVFTLDRE
RVNKETTYRGHTGSVDQLCWHAFTPELLSTASGDKTVRIWDIRAAKCSTVTNTKGENINI
TWSPDGRTIAVGNKEDLVTFIDTRTNKIRAEEQFNFEVNEIAWNNTSDMFFLTNGLGCVH
ILNYPGLELQHVLKAHPATCICIEFDPTGKYFATGSADALVSIWDANELACMRVLSRLDW
PVRTISFSYDGKLLASASEDLLIDIAHTETGEKVSDIPVDAATFTVAWHPKQYLLAYACD
DKDNSDRRREAGNLKVYGFSE
NT seq 966 nt   +upstreamnt  +downstreamnt
atgagtcgtaaaaacgccacaattgaagagttacagacatatttcaaaactcacagtaaa
atcaaagaacaaaaggcacacacttccaaggttcactcggttggttggagctgtgatgga
aaacgcttagcatcaggatcttttgataaaactgtagcagtcttcactctagatagagag
cgtgtgaataaagaaactacttatcgtggtcatactggttcagtggatcaactctgttgg
catgcatttactccagaactgttaagtacagctagtggtgacaaaacagtccggatatgg
gatataagagcggctaaatgttccacggtaacgaacaccaaaggcgagaacattaatata
acttggtcgcctgatggtagaaccattgctgttggaaataaagaggacttggttacattc
attgatacgaggacgaataagatccgagctgaagaacagttcaattttgaggtgaatgaa
attgcatggaacaacactagtgatatgttcttccttacaaacggccttggttgtgtacac
attctcaattatcccggactagagctacaacatgttcttaaggcccatcccgccacctgc
atttgcattgaattcgatccaacagggaagtattttgcaactggatcagcagacgccctt
gtctcgatttgggatgcaaacgaacttgcttgcatgagagttctttctcgcttagattgg
cctgtacgtacaatttcatttagttatgatggtaaactgctagcatcagccagtgaagat
cttctaatagatattgctcatactgaaacaggtgaaaaagtatctgatattccagtagat
gcagcaacttttacagtcgcatggcatcctaagcaatatttgcttgcttacgcatgcgat
gataaagacaatagcgacaggcgtcgagaggctggcaatttgaaagtttatggtttttct
gaataa

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