Eupeodes corollae: 129939625
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Entry
129939625 CDS
T09463
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129939625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecoe03019
]
129939625
Messenger RNA biogenesis [BR:
ecoe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
129939625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
129939625
NCBI-ProteinID:
XP_055903687
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All DBs
Position
1:complement(60164328..60175054)
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AA seq
872 aa
AA seq
DB search
MNKQKSKQHESRAETNDTTPKKPKIQHKIGDQTVEEYAKSGLGKIINATKIINAFPSGTS
RDLYCAYPTFGKIVDSQSYRIMGLISKVLKFQNIKGNIQRRQQDEQFEMLLECNDAMLER
INSNLDELAGIKKNPQTVVIESRLDGTATGKGAGSWNTKNRNETGSIKARLITAKNIARP
QIKFKMTVDNSSKTPFVPQIKDKPNSLKPLAVLPEYDEDGNIESYLHPYEFELMKFEPPT
AQLKKKSPVTPMPLEKTELVYVDTVNKLKSTLEDLKKFKEIGIDVEHHSYRTFQGITCLM
QISTREKDYILDALELRDELHILNEVFTNPKIVKIFHGADSDIEWLQRDLSLYVVNMFDT
HQAAKSLNLARLSLAYLLKHYCDIEADKTFQLADWRIRPLPEELVTYARQDTHNLIYIYE
RLTNDLLEQANNQTNVLRSVYQRSTELCKKRYKKPKISDDSHMEIFQKSKRVFDNRQLFA
LKEIFRWRDAIARQEDESYGYVLPNHMMMQISESLPREMQGILACCNPIPPLVRQNLHAL
HQIIHKAREQPLVKPILEANSVHRSVVSNVKDYNSKLYCPHDLSHLEEFRDDLPTLLKSS
DDQNEYTNESGNSSLCKPALSVFDTPENSEDEEVKEKLKKLQQMQFISPYARYVAVLPLV
EIEKREELARIEAENAKKVLCPVKTELPVKKEPIVKNEVDNMYNVPLKQNLKRKNPESLN
PQNQSQSPQEKRFKREHPKPLADGEHLKFVDLTKNTFRASKPTTQPEIVEDSEPSEPSST
SKPPTTATPDGKNGKFKKNKKKFKGNKVAQSSDKPVAFDYKNVDFKKFQGGAQKAKGTEL
KPKFHGKGGKNNKANNKKFNKLFTFSNVKNKK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaaaaatccaaacaacatgaatcgcgtgcagaaaccaacgacactacgccg
aaaaagccaaaaattcaacataaaattggagatcaaactgttgaagaatatgcgaagtct
ggactgggtaaaataataaatgccaccaaaatcattaatgcctttccttcgggcacatca
agagatttatactgtgcttacccgacctttggaaaaattgtcgattcacaatcctatcgc
atcatgggtcttatatcgaaagttttgaaatttcaaaatatcaaaggaaatatacaaaga
cgtcaacaagatgaacaatttgaaatgttgctcgaatgcaatgatgccatgctggaaaga
atcaattctaatttagacgaattagctggcatcaaaaagaatccacagacggtggttatt
gagtctcgtttagatggaacagccacaggcaaaggagctggaagttggaatacaaaaaat
agaaatgaaacaggatccataaaggctaggttgataactgcaaagaacatagctcgacca
cagataaagttcaagatgacagttgacaacagctccaaaacaccattcgtaccacaaatc
aaagacaaacccaattcactcaagcctctagcagttctgcctgaatatgatgaagatggc
aacattgagagctacctccatccgtatgaatttgaattgatgaaatttgaacctccaact
gcgcagctaaaaaagaaatcaccagttacaccaatgccactcgaaaagacagaacttgtt
tatgttgacactgttaataaattaaagtcaacactcgaagacctgaagaaattcaaagaa
atcggcattgatgtggaacatcactcctatagaaccttccaaggtattacttgcttaatg
caaatatccacacgtgagaaggactacatattggatgctctagagttgcgcgatgagctg
catattttgaatgaagtctttacaaatcctaagatcgtgaaaatcttccatggagctgat
tcggatatagaatggctgcagcgtgatctttccctttacgttgttaatatgttcgatact
catcaagctgccaaaagtctcaacttggctcggctttcgttggcctacttgttgaagcat
tactgtgacatagaagctgataagacgtttcagctagcggactggcgtattcgtccattg
cctgaagagttagtaacttatgctcgtcaagatacccacaacttgatttatatctacgag
cgactgacaaatgacctcctagaacaggcaaataatcaaacgaacgttttacgttcggtc
tatcaacgtagtacggaactatgcaagaagcgctataaaaaaccaaaaatcagtgatgac
tcgcatatggaaattttccagaagtcaaagcgagtatttgacaataggcaattgtttgcc
ttgaaagagattttccgttggcgtgacgcgattgctcgtcaagaggacgaaagctatggc
tatgtcctgcccaatcacatgatgatgcaaatatcggagagtttgccaagagagatgcaa
ggtattttggcttgttgcaatcccattccaccgcttgtgcgtcaaaatttacatgctctt
catcaaataatacacaaggctcgtgaacaacctttagttaagccaattctagaggccaat
agtgttcataggtcagttgtgtccaatgtaaaggactacaacagtaagttatactgtcct
catgacctttctcacttagaagaattccgagatgaccttcctactctcttaaagtcttct
gacgaccaaaatgaatacacaaatgaatctggcaacagcagcttgtgcaaaccagcattg
agtgtgtttgacactcccgaaaactcagaagatgaggaagttaaagaaaaattaaaaaag
ttacaacaaatgcagttcatcagtccatatgcccgctacgttgctgtcctgccattggtt
gagatagaaaagcgagaagaactagcaaggatagaagctgaaaatgctaagaaagtactt
tgtcccgttaaaactgaactgcccgtaaaaaaggagccaatagttaaaaatgaagttgac
aacatgtacaacgtgcctcttaagcaaaatcttaaacgaaagaatccagaaagcttaaat
ccccaaaaccaaagccaatcgccacaagaaaaaagatttaaaagagaacatccaaaacct
ctggctgatggcgaacatttgaaatttgtagaccttacaaaaaatacattcagagcttca
aaacctactactcaaccggagatagtagaagatagcgagccatcggaaccatcatccaca
tcgaaaccaccaacaacagcaacaccagacgggaaaaatggcaagttcaagaagaataag
aaaaaattcaagggcaataaggttgcccaatcttcggataaacctgtggcttttgattat
aagaatgtagactttaaaaagttccaaggaggcgcacagaaggcgaagggcaccgaattg
aaacccaagtttcatgggaagggtggcaaaaacaataaggctaataataagaaattcaac
aaactatttacatttagtaatgtaaaaaataaaaaatag
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