KEGG   Eupeodes corollae: 129939625
Entry
129939625         CDS       T09463                                 
Name
(RefSeq) exosome component 10
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ecoe  Eupeodes corollae
Pathway
ecoe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ecoe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129939625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecoe03019]
    129939625
Messenger RNA biogenesis [BR:ecoe03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     129939625
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 129939625
NCBI-ProteinID: XP_055903687
LinkDB
Position
1:complement(60164328..60175054)
AA seq 872 aa
MNKQKSKQHESRAETNDTTPKKPKIQHKIGDQTVEEYAKSGLGKIINATKIINAFPSGTS
RDLYCAYPTFGKIVDSQSYRIMGLISKVLKFQNIKGNIQRRQQDEQFEMLLECNDAMLER
INSNLDELAGIKKNPQTVVIESRLDGTATGKGAGSWNTKNRNETGSIKARLITAKNIARP
QIKFKMTVDNSSKTPFVPQIKDKPNSLKPLAVLPEYDEDGNIESYLHPYEFELMKFEPPT
AQLKKKSPVTPMPLEKTELVYVDTVNKLKSTLEDLKKFKEIGIDVEHHSYRTFQGITCLM
QISTREKDYILDALELRDELHILNEVFTNPKIVKIFHGADSDIEWLQRDLSLYVVNMFDT
HQAAKSLNLARLSLAYLLKHYCDIEADKTFQLADWRIRPLPEELVTYARQDTHNLIYIYE
RLTNDLLEQANNQTNVLRSVYQRSTELCKKRYKKPKISDDSHMEIFQKSKRVFDNRQLFA
LKEIFRWRDAIARQEDESYGYVLPNHMMMQISESLPREMQGILACCNPIPPLVRQNLHAL
HQIIHKAREQPLVKPILEANSVHRSVVSNVKDYNSKLYCPHDLSHLEEFRDDLPTLLKSS
DDQNEYTNESGNSSLCKPALSVFDTPENSEDEEVKEKLKKLQQMQFISPYARYVAVLPLV
EIEKREELARIEAENAKKVLCPVKTELPVKKEPIVKNEVDNMYNVPLKQNLKRKNPESLN
PQNQSQSPQEKRFKREHPKPLADGEHLKFVDLTKNTFRASKPTTQPEIVEDSEPSEPSST
SKPPTTATPDGKNGKFKKNKKKFKGNKVAQSSDKPVAFDYKNVDFKKFQGGAQKAKGTEL
KPKFHGKGGKNNKANNKKFNKLFTFSNVKNKK
NT seq 2619 nt   +upstreamnt  +downstreamnt
atgaataaacaaaaatccaaacaacatgaatcgcgtgcagaaaccaacgacactacgccg
aaaaagccaaaaattcaacataaaattggagatcaaactgttgaagaatatgcgaagtct
ggactgggtaaaataataaatgccaccaaaatcattaatgcctttccttcgggcacatca
agagatttatactgtgcttacccgacctttggaaaaattgtcgattcacaatcctatcgc
atcatgggtcttatatcgaaagttttgaaatttcaaaatatcaaaggaaatatacaaaga
cgtcaacaagatgaacaatttgaaatgttgctcgaatgcaatgatgccatgctggaaaga
atcaattctaatttagacgaattagctggcatcaaaaagaatccacagacggtggttatt
gagtctcgtttagatggaacagccacaggcaaaggagctggaagttggaatacaaaaaat
agaaatgaaacaggatccataaaggctaggttgataactgcaaagaacatagctcgacca
cagataaagttcaagatgacagttgacaacagctccaaaacaccattcgtaccacaaatc
aaagacaaacccaattcactcaagcctctagcagttctgcctgaatatgatgaagatggc
aacattgagagctacctccatccgtatgaatttgaattgatgaaatttgaacctccaact
gcgcagctaaaaaagaaatcaccagttacaccaatgccactcgaaaagacagaacttgtt
tatgttgacactgttaataaattaaagtcaacactcgaagacctgaagaaattcaaagaa
atcggcattgatgtggaacatcactcctatagaaccttccaaggtattacttgcttaatg
caaatatccacacgtgagaaggactacatattggatgctctagagttgcgcgatgagctg
catattttgaatgaagtctttacaaatcctaagatcgtgaaaatcttccatggagctgat
tcggatatagaatggctgcagcgtgatctttccctttacgttgttaatatgttcgatact
catcaagctgccaaaagtctcaacttggctcggctttcgttggcctacttgttgaagcat
tactgtgacatagaagctgataagacgtttcagctagcggactggcgtattcgtccattg
cctgaagagttagtaacttatgctcgtcaagatacccacaacttgatttatatctacgag
cgactgacaaatgacctcctagaacaggcaaataatcaaacgaacgttttacgttcggtc
tatcaacgtagtacggaactatgcaagaagcgctataaaaaaccaaaaatcagtgatgac
tcgcatatggaaattttccagaagtcaaagcgagtatttgacaataggcaattgtttgcc
ttgaaagagattttccgttggcgtgacgcgattgctcgtcaagaggacgaaagctatggc
tatgtcctgcccaatcacatgatgatgcaaatatcggagagtttgccaagagagatgcaa
ggtattttggcttgttgcaatcccattccaccgcttgtgcgtcaaaatttacatgctctt
catcaaataatacacaaggctcgtgaacaacctttagttaagccaattctagaggccaat
agtgttcataggtcagttgtgtccaatgtaaaggactacaacagtaagttatactgtcct
catgacctttctcacttagaagaattccgagatgaccttcctactctcttaaagtcttct
gacgaccaaaatgaatacacaaatgaatctggcaacagcagcttgtgcaaaccagcattg
agtgtgtttgacactcccgaaaactcagaagatgaggaagttaaagaaaaattaaaaaag
ttacaacaaatgcagttcatcagtccatatgcccgctacgttgctgtcctgccattggtt
gagatagaaaagcgagaagaactagcaaggatagaagctgaaaatgctaagaaagtactt
tgtcccgttaaaactgaactgcccgtaaaaaaggagccaatagttaaaaatgaagttgac
aacatgtacaacgtgcctcttaagcaaaatcttaaacgaaagaatccagaaagcttaaat
ccccaaaaccaaagccaatcgccacaagaaaaaagatttaaaagagaacatccaaaacct
ctggctgatggcgaacatttgaaatttgtagaccttacaaaaaatacattcagagcttca
aaacctactactcaaccggagatagtagaagatagcgagccatcggaaccatcatccaca
tcgaaaccaccaacaacagcaacaccagacgggaaaaatggcaagttcaagaagaataag
aaaaaattcaagggcaataaggttgcccaatcttcggataaacctgtggcttttgattat
aagaatgtagactttaaaaagttccaaggaggcgcacagaaggcgaagggcaccgaattg
aaacccaagtttcatgggaagggtggcaaaaacaataaggctaataataagaaattcaac
aaactatttacatttagtaatgtaaaaaataaaaaatag

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