Eupeodes corollae: 129941575
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Entry
129941575 CDS
T09463
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ecoe
Eupeodes corollae
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecoe03041
]
129941575
03009 Ribosome biogenesis [BR:
ecoe03009
]
129941575
Enzymes [BR:
ecoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129941575
Spliceosome [BR:
ecoe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129941575
Ribosome biogenesis [BR:
ecoe03009
]
Eukaryotic type
90S particles
Helicases
129941575
Pre-60S particles
129941575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
AAA_22
Motif
Other DBs
NCBI-GeneID:
129941575
NCBI-ProteinID:
XP_055906224
LinkDB
All DBs
Position
1:complement(52141786..52154380)
Genome browser
AA seq
630 aa
AA seq
DB search
MSLREKILMKKIKKREKMKKELAVKKGQIQNGNDENGLEEDFSEAPQVKKVPKKKKKQIV
QEVTQENDSSAEEEVQAPVEKSKKSSKAEPINKKKKLEKPTVQEEPEEEESSDENGEENG
ESNGNNVSTRDPDDLSFASLKGLVSDESLKAIAEMGFTSMTEIQAKSIPPLLEGRDLVGA
AKTGSGKTLAFLIPAVELIYKLRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTY
GLVMGGSNRSVESEKLGKGVNILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIG
FEEELRQIVNLLPKRRQTMLFSATQTDKIDALSKLALKKEPIYVGVDDQEETATVSGLEQ
GYIVCPSEKRLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQT
KRTTTFFGFCNAESGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGQGS
SGHALLILRPEELGFLRYLKMAKVPLNEFEFSWNKIADIQLQLEKLISKNYFLNQSAKEA
FKGYVRAYDSHQLKTIFDVNTLDLQTVAKSFGFLVPPVVDLKIGFRRKRPEKRVGGGGYG
YYRELNEEKSSQKVYKQVTREQLKKKKFTR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcgcgaaaaaatcctcatgaagaaaatcaaaaaacgagaaaaaatgaagaaa
gaacttgctgttaaaaagggacaaatacaaaacggtaacgatgagaatggattagaagaa
gacttctcagaagctccacaagtgaaaaaggttccaaaaaagaagaagaaacaaattgtt
caagaagttacccaggaaaatgattcctcagcagaagaagaagtccaggcaccagtagaa
aagagcaaaaagtcatcaaaagcagagcctataaacaagaagaaaaaacttgaaaaaccc
accgttcaagaagaaccagaagaagaagaatcttccgatgaaaacggtgaagagaatgga
gaaagcaacggaaacaacgtcagcactcgtgaccccgacgacttgtcctttgcttctctc
aaaggcctggtgtctgatgaatcccttaaggcaatcgccgagatgggtttcacttccatg
acggaaattcaagccaaatccattccaccattgttggagggacgtgatttagttggtgct
gccaagactggatcaggaaagaccctagcttttcttatacctgctgtggagctaatttac
aagttaaggtttatgccaagaaatggcacaggtgtcatcatcatctcaccaacccgtgaa
ttgtctatgcagacatttggagtactcaaagaattgatggctcatcatcatcatacctat
gggttggtaatgggaggttccaatcgttcggtcgagagtgagaagttaggaaaaggtgtt
aacattcttgtggcgactcctggtcggctactggatcacttgcagaattctccggatttc
ctttacaagaacctgcaatgcctgattattgatgaagtcgatcgaattcttgaaattggt
ttcgaagaggaacttaggcaaattgtcaatttgcttccaaaacgccgccaaacaatgtta
ttctctgccacacaaaccgacaaaatcgatgccctttcgaaattagccttgaaaaaagaa
ccaatctatgttggggtcgacgatcaagaggaaacagctacagtaagtggcttggaacag
ggctacattgtgtgtccatctgaaaaacgtctattagtgctttttacgttcctgaaaaag
aatcgcaagaagaaggttatggtattcttttcatcgtgcatgtctgttaaatatcatcat
gaattattcaactatattgatcttccagtcacatcgattcatggaaaacaaaaacaaacc
aagcgaacaacaactttctttgggttctgcaatgctgaatcgggtatcttgttgtgtaca
gatgtagcagctcgtggtttggatattcctgcagttgattggattgttcaatatgatcct
ccagatgatccaaaggaatacatccatcgtgttggccgaacggctcgtggacaaggtagt
tcaggacatgcattgcttattttaagacccgaagaattgggattcttgagatatttgaaa
atggctaaagtgccattgaatgagttcgagttttcatggaataaaattgctgatattcaa
ttgcagttggagaaactaatttcgaagaattacttcctcaatcaatcggccaaggaggca
ttcaagggatacgttcgggcatatgattcgcatcaattgaaaacaatattcgatgtgaac
actctggacttacaaacggtggcgaaaagttttggattcctagtgccgccagtggttgat
ttgaagattggttttagaagaaaacgtcccgagaaacgtgtaggtggaggtggttatggc
tactacagagaattgaacgaagagaaatccagccaaaaggtctacaaacaagtgacacgc
gaacaattgaagaagaagaaatttacaagatga
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