Eupeodes corollae: 129941947
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Entry
129941947 CDS
T09463
Name
(RefSeq) ATP-dependent RNA helicase p62 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129941947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecoe03041
]
129941947
03009 Ribosome biogenesis [BR:
ecoe03009
]
129941947
Enzymes [BR:
ecoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129941947
Spliceosome [BR:
ecoe03041
]
Complex A
U1 snRNP components
U1 related factors
129941947
Complex B
129941947
Ribosome biogenesis [BR:
ecoe03009
]
Eukaryotic type
Pre-60S particles
Helicases
129941947
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Utp25_C
Cas3-like_C_2
WelO5
Motif
Other DBs
NCBI-GeneID:
129941947
NCBI-ProteinID:
XP_055906701
LinkDB
All DBs
Position
1:45458863..45468440
Genome browser
AA seq
586 aa
AA seq
DB search
MSPHDRNFNGRGSGGRGGRDDRGSRGGASGGGGVRNGRIDKRTDRRGGGGGGMGGGNRNN
GGDLELYDVDWSNLEPFKKNFYQEHPKVANRNPQDVQRYRDQHEITIRGKAPNPIEDFSE
VNLPDYVAKEIKRQGYKAPTAIQAQGWPIAMSGDNLVGIAKTGSGKTLGYILPAIVHINN
QKPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQARDLQRGC
EIVIATPGRLIDFLASGTTNLQRCTYLVLDEADRMLDMGFEPQIRKILTQIRPDRHTLMW
SATWPREVKQLAEDFLGSYVQINIGSLELSANHNIKQVVEVCDEHDKEEKLKTLLSDIYD
TSENPGKIIIFVETKKRVDHLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILV
ATDVAARGLDVDGIKYVINFDYPQSSEDYIHRIGRTGRSETKGTSYAFFTKNNARQSKAL
VDVLREANQEISPALEQLMRNNRGGFDSNRRYGGGGGSRFGNNGGTFRKGTLGGGSKFGG
GGGRGGGYGGNSGGFGGGNRDNGFGRENGGGSGGGGNSNGRHTRFD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctcatgatagaaacttcaatggccgtggcagtggtggacgtggtggtcgcgat
gaccgtggaagccgcggtggtgcatccggaggtggtggtgtacgcaatggacgcatagac
aagcgaactgaccgtcgtggaggtggtggaggaggaatgggtggaggaaatcgtaataac
ggtggcgacttggagctctacgacgttgactggtccaacttggaaccattcaagaagaac
ttctatcaagagcatcccaaagtagcaaatcgcaacccacaagatgtccaacgctatcgt
gatcagcatgagattaccatccgtggtaaggctcccaacccaattgaggacttctccgag
gtaaatctacccgattatgtggccaaggagatcaaacgccagggatacaaggcaccaaca
gcaatccaagcccaaggctggcccattgccatgagtggcgacaatcttgtcggtattgcc
aagaccggatcaggcaagactctgggttacattctacccgcaattgtccacatcaacaac
cagaagccattgcaacgtggcgatgggcccatcgccctcgtcttggctccaactcgtgaa
ttagcccaacaaatccaacaagtagcaacagaattcggttcgtcctcgtacgttcgcaac
acatgcgtctttggaggagctccaaagggcggtcaagccagagacttgcagcgtggctgt
gaaattgtcatcgccactcccggtcgtcttattgatttcctcgcttcgggaaccacaaac
ctacagagatgcacatacttggtgctcgacgaggcggatcgtatgttggacatgggtttc
gagccccagattcgcaagattctcacacaaattcgccccgacagacacactcttatgtgg
agtgcgacttggccacgtgaggtgaagcaattagctgaggatttcctcggcagctatgtt
caaatcaatatcggttcattggaactctctgccaatcacaatatcaaacaagttgttgag
gtttgcgatgagcatgacaaggaagaaaaactaaaaacactactctctgatatctacgac
accagcgagaatcccggcaaaattatcattttcgtcgagaccaagaaacgtgtcgaccat
ttggtgcgtttcattcgtagcttcggtgtccgttgcggcgccattcacggagacaagtca
caatcagagcgagatttcgttttgcgcgagttccgttcgggcaaatcaaatattttggtt
gccacagatgttgctgctcgtggtttagatgttgacggtattaagtacgtgataaacttt
gactacccacaatcgtcggaggattacattcatcgtatcggcaggacaggtcgatcagaa
accaagggtacatcgtatgcattcttcacaaagaacaacgcccgccagtcaaaggctctt
gtcgacgttctccgtgaagcaaatcaggaaatctcacccgcacttgaacaattgatgcgt
aacaaccgtggaggcttcgatagcaatcgtcgttatggcggtggtggcggttcccgattc
ggcaacaatggtggtaccttcagaaagggtacacttggaggaggtagtaaattcggcggc
ggcggtggccgtggaggtggctatggaggaaacagtggtggtttcggaggtggaaaccga
gataacggtttcggccgagagaacggaggtggtagtggcggcggcggcaacagcaacggc
agacacacgcgattcgattag
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