Eupeodes corollae: 129942139
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Entry
129942139 CDS
T09463
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129942139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecoe03400
]
129942139
DNA repair and recombination proteins [BR:
ecoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129942139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
129942139
NCBI-ProteinID:
XP_055906922
LinkDB
All DBs
Position
1:complement(293922660..293930131)
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AA seq
1169 aa
AA seq
DB search
MSKRPSVGGTPKGNTLFNYFNKSPATSAKKIPKTEESPRESSKKIPKTEESPRESSKKSS
KTEDSPQKSSKKIPKPEESSQNGTKIKTEEDSTETKPIKRQLEVDFSDSDQEEIVVQKKK
RSKVSRIVSDDEEDDNHNDSSHKNGHKTIEPKEEMDVDDEKPTVLMEKLKNLQDEPSRKT
KKDQVKLDEIVNTGSTLDEPVVWLHNKLEFLKPDKIKDKKGRRPDHPDYNPGTLFVPESF
LNSQTPGMRQWWVLKQDNYDCVLFFKVGKFYEFYHMDADVTINELGFSYMRGEFAHSGAP
EGTYDKMATTLIERGYKVARIEQTETPDMMTERCKKQGKTTKFDKVVKREICQISNRGTQ
IYGSHYCQITPNYQPNYMLSVVEKNEGPTSKYGICFTDTSIGDFYMGEFEDDKSCSRFLT
LVSHHFPVLIVSEKQTLSSRTQQIYRTVLSGVLKEYLPSGSQSWTAEKTLKHLGETLYTK
SGKDWPILIKSMQDEGDHLGLTPNEYYKLALKALGGCINYLKRCHLEEKIMPMARYHLYV
PPDMINKSIENAKAPKSNAKQSQMKNHMVLDSITLSNLRITGEEHSLCSTLDQCCTKFGK
RLLHNWVCSPSCNIEIIRERQNAISDLMSTDEVLKEARALLATLPDFERYLAQMHMFGNK
LVAEKHPDGRAIFFDEKIYNKKKIQNFINILKGFEAVQQIPEMFKNCESSLIKRLSQMEP
DGCFPDLKKVLKFFKKAFDHEEALKTGVIAPEKNVDAEFDNIESRIDEINKKLQEYLVKQ
EKYFGCRLSYFGSDKKRFQLEVPESHARKAGKDYFLEGQKKGTKPCRRFHTDETKSFLKQ
MQQAEDDRNNVLRDLSRRVFEKFSNHYDLWKQCLDNVSTLDVLCSLAEYARCQNFICVPE
LVEDADTPFIEIDEGYHPCVASESYIPNGIVLGASGNAPLSLLTGPNMGGKSTLMRQIGL
LVVMAQIGCHVPAQSCKLSLVDRIFTRLGAQDDILSGHSTFLVELNETSLILKHATVNSL
VLLDELGRGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDFFHQDDRVVLGHMACM
VENEDTEDPTQETVVFLYKYTSGACPKSYGFNAAKLAGMSHSIIKRAFELSKKVEAIALR
RKIASKVMAGADTSSIKNLIVQLNTCKVH
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacgacccagtgttggaggcactccaaaaggtaataccttatttaattatttc
aacaaatccccagcaacgtctgcaaagaaaattccaaaaactgaagaatcaccccgtgag
tcttcaaagaaaattccaaaaactgaagaatcaccccgtgagtcttcaaagaaatcatca
aaaactgaggattcaccacaaaagtcttcaaagaaaataccaaaacctgaagaatcatcc
caaaatggcactaaaatcaaaacagaagaagactcaaccgaaactaaaccaattaaacgc
caattggaagtcgacttcagtgattcagatcaagaggaaatagttgtacagaagaaaaaa
cgttccaaagtttcacgtattgtatctgatgacgaagaagacgacaaccataatgattcg
agtcacaaaaatggccacaaaaccattgaacccaaagaggagatggatgtcgatgatgag
aaacccacggttttaatggaaaagctaaagaatcttcaagatgaaccgtctagaaaaaca
aagaaagaccaagtaaaactcgacgagattgtcaacaccggttcaacactcgatgaacct
gttgtctggcttcacaacaagttggaattccttaagccagataaaatcaaagacaagaaa
ggtcgacgtccagatcatccagattataatcctggaacactatttgttcctgagagtttt
cttaattctcaaacaccgggaatgagacaatggtgggttcttaagcaagacaactacgat
tgtgtgttgttcttcaaagttggtaaattctatgaattctatcacatggatgctgatgtc
actataaatgaactgggattcagctacatgagaggagaattcgctcattctggagctccc
gaaggaacatacgataaaatggctacaactttaatagaacgaggttacaaggtggctcga
atcgaacaaacagaaaccccagacatgatgaccgagagatgtaagaagcaaggtaaaact
actaaattcgataaagttgtgaagagagaaatctgtcagatctcgaacagaggaactcag
atctacgggtcacattactgccaaataactcccaattatcagccaaactatatgctctct
gttgttgaaaagaatgaaggtcctacaagtaaatatggaatctgtttcactgatacctca
attggagacttttatatgggtgaattcgaagatgacaaaagttgctctcgtttcctaact
ctagtgtctcatcattttcctgttttgattgtttctgaaaagcaaacactctcatcccgc
acccaacaaatctatagaactgtactcagtggtgttctcaaagaataccttccatctggc
agtcagtcgtggactgctgaaaaaactcttaagcatttaggtgaaacgttgtatacgaag
tctggaaaagattggccaatcttgatcaaatcaatgcaagatgagggcgaccatctgggt
cttactcctaacgaatactataagctggcattaaaagcactgggaggctgtatcaactat
ctcaaacgatgtcatctcgaagagaagatcatgccaatggcgcgatatcacttatatgtt
ccaccagacatgatcaacaaatccattgaaaatgccaaagcaccaaagtccaatgccaaa
caaagccaaatgaagaaccacatggtacttgattccataacgttgtccaatcttagaatc
accggagaagaacactcactctgtagcactcttgatcagtgttgtacgaagtttgggaaa
cgtcttctccacaattgggtctgctcgcccagttgtaacatcgaaatcattcgtgaacga
caaaatgccatatctgacttgatgtctaccgatgaagttctcaaggaagccagagctctc
cttgctacactgcctgattttgagagatatttagcacaaatgcatatgtttggaaataag
ttagtggctgagaaacatcccgatggacgagctattttctttgatgagaaaatctataac
aagaaaaagattcagaatttcatcaatattttaaaaggatttgaggctgtacaacaaatt
ccagagatgttcaaaaactgtgagtcaagtttgattaagcgtttatcacaaatggaaccc
gatggatgttttcccgatttaaagaaagttttgaagtttttcaaaaaagcgtttgaccac
gaagaggctctcaagacaggtgtcatagctcccgagaagaatgtcgatgccgagttcgat
aatatcgaatcaagaatcgatgaaatcaataagaaactacaagaatacctcgtaaaacag
gaaaagtactttggctgtcgtttaagttattttggaagcgacaagaaacgtttccaactc
gaagttcccgaaagtcatgccagaaaagccggtaaagattatttcctggaaggacagaaa
aaaggcacaaaaccgtgtcgtcgattccataccgatgaaacaaagagcttccttaaacaa
atgcaacaagctgaagatgatagaaacaacgttctccgtgatttatcgcgaagagtcttt
gagaaattttcaaatcactacgacttgtggaaacaatgtctcgacaacgtgtccacttta
gatgtcctatgctcccttgccgaatatgctcgatgccagaattttatatgtgttccggaa
ttagtggaagatgctgatacgccattcattgaaatcgatgaaggttatcatccttgtgtg
gcgagcgagtcttatattccaaatggtattgtattaggagcatctggaaatgctccattg
tctctgctaactgggccaaatatgggaggtaagagtacgttgatgagacaaatcgggctt
cttgtggttatggcacagattggatgtcacgttcccgctcaaagttgtaaactatcgctg
gttgatagaatattcactcgattgggtgctcaagatgacattctttctggtcatagtaca
ttcctggtggagcttaatgagacttcattaattcttaagcatgctacagttaacagtttg
gttcttcttgatgaattaggccgtggaactgcaacttatgatggtaccgccattgcagct
tcagtcgttaactttttggcgaatcttaagtgtaggacactcttctctacacattatcac
aatttgattgacttcttccatcaagacgatcgtgttgtcttgggccatatggcatgcatg
gtagaaaatgaagataccgaagatccaactcaagaaactgttgttttcttatacaaatac
acatcaggagcatgtccaaaatcgtatggtttcaatgctgctaaattggcgggaatgtca
cattcgattataaaaagagcttttgagctttctaaaaaagttgaagcaattgctttgagg
agaaaaattgcttcaaaagttatggcaggagcagatacctcatctattaagaatctaatt
gtccaattgaatacttgtaaagtccattaa
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