Eupeodes corollae: 129942442
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Entry
129942442 CDS
T09463
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03020
RNA polymerase
ecoe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129942442
09124 Replication and repair
03420 Nucleotide excision repair
129942442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecoe03021
]
129942442
03400 DNA repair and recombination proteins [BR:
ecoe03400
]
129942442
Enzymes [BR:
ecoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129942442
Transcription machinery [BR:
ecoe03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129942442
DNA repair and recombination proteins [BR:
ecoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129942442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
129942442
NCBI-ProteinID:
XP_055907344
LinkDB
All DBs
Position
1:complement(164124042..164142511)
Genome browser
AA seq
1890 aa
AA seq
DB search
MASSDSKAPVRQVRRVQFGILSPDEIRRMSVTEGGVMFPETMEGGRPKLGGLMDPRQGVI
DRTSRCQTCAGNMTECPGHFGHIDLAKPVFHIGFITKTIKILRCVCFYCSKMLVSPNNPK
IKEIVMKSKGQPRKRLAYVYDLCKGKTVCEGGEDMDMTKEGHQVDPGKKQGHGGCGHYQP
SIRRTGLELTAEWKNVNEDSQEKKIAITGERVWEILKHIVDEECFILGMDPKYARPDWMI
VTVLPVPPLSVRPAVVMFGAAKNQDDLTHKLADIIKANNELKKNEASGAAAHVIQENIKM
LQFHVATLVDNDMPGMPRAMQKSGKPLKALKTRLKGKEGRIRGNLMGKRVDFSARTVITP
DPNLRIDQVGVPRSIAQNLTFPELVTPFNIDRMQELVRRGNSQYPGAKYIVRDNGERIDL
RFHPKPSDLHLQCGYKVERHLRDDDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCT
SPYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAVRKMT
KRDVFINREQVMNLLMFLPTWDGKVPQPCILKPRPLWTGKQIFSLIIPGNVNMIRTHSTH
PDEEDDGPYKWISPGDTKVMVEHGDLIMGILCKKTLGTSAGSLLHIVFLELGHEIAGRFY
GNIQTVINNWLLLEGHSIGIGDTIADPQTYNEIQMSIKKAKDDVICVIQKAHNMELEPTP
GNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGAKGSNINISQVIACVG
QQNVEGKRIPYGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLID
TAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLPTV
KLSNKSFEKRFKFDWSNERYMRKVFADDVIKELSESNNALPELETEWEQLCRDREALRQI
FPSGESKVVLPCNLQRMIWNVQKIFHINKRVPTDLSPLRVIHGVRDLLQRCVIVVGNDRL
SKQANENATLLFQCLVRSTLCTKYVAEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGA
LAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGGAAR
DAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQRTVISEDQEFVNVYYEMPDFDPTRISP
WLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNADKLVLRIRIMNNEENKF
QDSEEDAVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIVITETGEF
KAIGEWLLETDGTSMMKVLSERDVDPVRTFSNDICEIFQVLGIEAVRKSVEKEMNAVLQF
YGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDASAHAET
DPMRGVSENIIMGQLPKMGTGCFDLLLDAEKCRFGIEIPSTLGAGNLVGGMFFGAASTPS
MTPPMTPWVQCGTPRFFSPPSGTISGMTPGGPSFSPSAQSDASGMSPSWSPGHPGSSPSS
PGPPMSPFFPPSPSASPAYSPTSPHYTASSPGAASPTYSPSSPNYSPTSPAYGSASPRFT
STTPNFGPQSTGYSPTSSGYSPTSPIFSPTLKYQSSSTPSFSGGGSNTYSPNSAYSPTST
NYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPASPSYSPSSANYTPNTPSYSPTSPNFSA
SPHYSPASPAYSQTGGKYSPTSPTYSPPSPSYDGSPQYTPGSPQHSPASPKYSPTSPLYS
PSSPQHSPANQYSPTGSNYSTTSPHYTPNMSIYSPSSPKYSPTSPNYTPTSRNYSPTSPM
YSPTVPSSTGYSPTSPAYSPSSPTYDETDD
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgagcgattccaaagctcctgttcgccaggttcgcagagtgcaattcggtatt
ttatcccctgatgaaatccgtcgcatgtctgtgaccgaagggggagtcatgttcccagaa
accatggaaggtggtcgtcccaaacttggtggactcatggatccccgccagggtgtcatc
gatcgtacctcaaggtgccaaacctgcgccggaaatatgacagaatgccctggacatttc
ggccacatagatctggcaaagccagtttttcacattggtttcataacaaaaaccatcaag
atcctacgatgtgtatgcttctactgttccaaaatgttggtctccccgaacaacccaaag
atcaaagaaattgtcatgaaatccaagggtcagcctcgtaagcgattggcgtatgtgtac
gatttgtgcaaaggcaaaaccgtgtgcgagggtggtgaagacatggacatgactaaggaa
ggccaccaagtggatccgggcaagaagcaaggccacggaggttgtggtcattaccagcct
tctatccgccgtacaggacttgagttgactgccgaatggaagaacgtcaatgaagattca
caggagaagaaaattgccataactggcgaacgggtttgggaaatccttaagcacatagtg
gacgaggagtgcttcatcctgggcatggaccctaagtacgcacgccccgattggatgata
gtcacagtgttgccagttcccccgctatccgtccgtccggctgtggtcatgttcggcgca
gccaagaatcaggatgatttgacgcacaaactggccgacatcataaaggccaacaacgag
ttaaagaagaacgaagcgtcgggtgctgccgcccacgttattcaagaaaacattaaaatg
ttgcagttccatgtggcaactctagtagacaacgatatgccgggaatgcctcgggccatg
cagaagtccggaaaacctctgaaggcattgaaaactcgcctcaagggtaaagaaggacgt
attcgtggtaatttgatgggaaagcgtgtggatttctccgctcgtactgtcatcacacct
gaccctaacttgcgtatcgatcaggttggtgtcccccgatctatcgcccagaatctaaca
ttccccgagttggtgacgccgtttaatattgacagaatgcaggaattggtgcgacgtggt
aattcgcagtatcctggagcaaaatacattgtccgggacaatggagagcgtatcgattta
cgtttccaccctaaacccagtgacttgcatttgcaatgcggctacaaggtagagcggcat
ttgagagatgacgacttggttatcttcaaccgtcagccaacgctgcacaagatgagtatg
atggggcatcgtgtgaaggttctgccctggtcgacattccgtatgaacttgtcgtgtact
tcaccctacaacgctgatttcgatggtgacgaaatgaatctgcacgtcccacagtcaatg
gagacgcgtgccgaggtcgagaacattcacatcactcctcgacagattattacaccgcag
gccaataaacctgtcatgggtattgtgcaggacaccctgacggccgttcgaaagatgacc
aagcgtgatgtgttcataaatcgcgaacaggtcatgaatctactgatgttcttgccaact
tgggatggcaaggtaccgcaaccgtgtattctgaagccgcgtccattgtggacgggcaag
caaatattctcgctgattattcctggcaacgtcaacatgattcgtacacattcaacccat
cctgatgaagaagatgacggaccgtacaaatggatctcacccggagacaccaaagtcatg
gtcgagcatggagacttgataatgggtattttgtgtaagaagaccttgggtacttcggca
ggatcgttgctgcatattgttttcttggaattgggacacgagatcgccggtcgcttctat
ggtaacattcagactgtcatcaataactggttgttgctggagggccacagtatcggtatt
ggtgatacaattgctgatcctcagacatataacgagattcagatgtccattaagaaggcc
aaagacgatgtcatctgtgttattcagaaggcgcacaacatggaacttgaaccaacacca
ggtaataccctacgtcagactttcgagaatcaagtaaatcgtattttgaacgatgctcgt
gacaaaactggtggctctgctaagaaatcgttgacagaatacaacaatttgaaggctatg
gtggtgtctggtgccaagggttccaacattaacatttcccaagttattgcctgtgtgggt
caacagaacgtcgaaggtaaacgtattccatatggttttcgtaagcgtaccctgccacat
ttcatcaaagacgattacggtcctgaatccaggggtttcgttgaaaattcatatcttgcc
ggattgacaccgtccgaattctatttccacgctatgggaggtcgagaaggtcttattgat
actgctgtaaaaacagctgaaaccggttatattcagcgtcgtctgataaaggctatggag
tctgtcatggtaaactatgacggtacagtacgtaattcagtgggtcagctgattcagttg
cgttatggtgaggatggtctgtgtggagaaactgtcgaatttcagaatttgccgacagtc
aaactttcgaataagtcatttgagaagaggtttaaatttgattggtccaatgaacgatac
atgcggaaggttttcgccgatgatgtcataaaggagttaagcgaatcgaataacgccctc
ccagagttggagaccgaatgggaacagttgtgccgtgatcgtgaggctctaagacaaatt
ttccccagtggagaatcaaaggtggtattgccttgtaatttgcaacgtatgatctggaat
gtccagaagattttccatattaacaaacgtgtacccactgatttgagtccactacgagta
attcatggtgtgagggatcttctgcagcgttgtgtaatagtggtaggcaacgatcggctt
tccaaacaagccaacgaaaacgccacgttactgttccagtgcttggttcgttcaactctg
tgcaccaagtatgtggcggaagaattccgtctctctactgaggcctttgagtggttgatc
ggagaaatcgaaacacgcttccaacaggcgcaggcaaatcctggtgagatggtgggtgct
ttggctgcccagtcacttggagagcctgccacacagatgacattgaacactttccatttt
gctggtgtgtcgtcgaagaacgtaaccctgggtgtaccgcgtctcaaggaaattatcaat
atatccaagaaacctaaggctccttccctaacggtgttccttactggaggtgcggctcgt
gatgcagaaaaagccaagaacgtcctctgtcgcttggagcacacaactttgcgtaaggtc
acagcaaacacagctatttactacgacccagatccgcagcgcacagtcatatcagaggat
caggagttcgtcaatgtttactacgaaatgcctgatttcgaccccacacgtatatctccg
tggttgctgcgtatcgaactcgatcgcaagcgtatgacagataagaaactgacaatggaa
caaattgcggagaagattaacgctggcttcggagatgacttgaactgcatctttaatgac
gacaatgcagataaactcgtcctccgaattcgtataatgaacaacgaagaaaacaaattc
caagactccgaggaggatgccgtggataagatggaagatgacatgttcctgcgttgcatt
gaggcaaatatgttgtccgacatgaccctgcagggtatcgaggccattggcaaagtgtat
atgcatttaccacaaacagacagtaagaagcgtattgtcatcacggaaactggtgaattc
aaggctattggagagtggcttctggaaactgatggtacatcaatgatgaaggttctgagt
gagcgggacgtggaccctgtgagaacgttttccaatgatatttgtgaaattttccaagta
ttgggaatagaggctgtacgtaagtcggttgaaaaggaaatgaatgctgtgttgcagttc
tacggattgtacgtgaactaccgacatttggctttgttgtgtgacgtaatgacagcgaag
ggccatttgatggccatcactcggcacggtatcaacagacaggatactggtgctcttatg
agatgttccttcgaagaaactgttgatgtgttgatggatgcgtctgctcatgcagagacc
gaccctatgagaggtgtctctgagaatattattatggggcagttgccaaaaatgggaact
ggttgctttgatttactgttagacgcagagaaatgtcggtttggaattgaaatccccagt
acattaggtgctggcaatctagtcggaggtatgttctttggagcagcatcaacaccaagc
atgaccccacctatgacaccatgggtgcaatgtggtacaccgagattcttctcgccacca
tcaggaacaataagcggcatgactccaggtgggccgagtttctctccttctgcacaatca
gatgcctctggaatgtcaccaagttggtctccgggtcatccaggatcttcaccaagctct
cctggaccaccgatgtcgccgtttttcccaccatctccgagtgcatcacctgcgtactcg
ccaacgagtccccattacaccgcttcgtctcccggagcagcatcgccaacatattcacct
tcaagccccaattattctccaacaagtccagcctatgggtcagcaagcccacgattcact
tctacaacgcccaatttcgggccacagtcaacgggttattctccaacatcgagcggttat
tcaccgacatccccgattttttctccaactttgaagtatcaatcctcgtcgacaccgtca
ttttcgggaggtggatcaaatacatattcgcccaacagtgcttattctcccacaagcacc
aattactcaccaaactccccgagttactccccgacatctccctcttattccccttcaagt
ccatcatattcaccgacatcgccgtgttattcgccggcatcaccgtcgtattctccatca
tcggcaaactacaccccgaatacgccatcgtattctcctacatctcccaatttttcagca
tccccacactattctcccgcatccccagcatactcacaaacaggaggcaaatactcgcca
acttcgccgacttattcgccaccttcgccgtcctacgacggaagtccacaatacacccca
ggatcaccccaacattctccggcaagccccaaatattcaccaacttcaccgctatattca
ccaagttcgcctcagcactctccggccaaccaatatagcccaactggaagcaactattca
acgacaagtccgcattacaccccgaatatgtcaatttattcaccgagcagtcccaaatat
tcacccacaagtccaaactatacaccaacttcaaggaactattccccaaccagtccgatg
tattcgccgactgttccctcttcaacaggatacagccctacaagcccagcctattcacca
agtagtcctacatatgacgaaactgacgattag
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integrated database retrieval system
