Eupeodes corollae: 129943080
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Entry
129943080 CDS
T09463
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129943080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecoe03021
]
129943080
03019 Messenger RNA biogenesis [BR:
ecoe03019
]
129943080
Transcription machinery [BR:
ecoe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129943080
Messenger RNA biogenesis [BR:
ecoe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
129943080
U7-dependent histone pre-mRNA processing factors
129943080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
TOR1L1_N
API5
HTH_22
INTS7_N
Motif
Other DBs
NCBI-GeneID:
129943080
NCBI-ProteinID:
XP_055908274
LinkDB
All DBs
Position
1:225827921..225835416
Genome browser
AA seq
1134 aa
AA seq
DB search
MSGILGRTQFLGETSNLFTDEKTATARTRVVEWFNEMMVAEPATKCELLAKIQEIILATC
PELIEEFLEHILSFGHDPHTDVRKQIIGFMEQICKLKPEFMPQIVNVISMLLRDSSAQVI
KRVIQACGSIYKNGLKWICTRAEITDSTEQAWNVLSLVKAQILDMIDNDNDGIRTNALKF
LEGVIILQTYPDEDSQKREDDFSLEDIPLTLKIMRRRKLEEEAMNIFDILLKFHAATHVS
SVNLIACTGSLSTIAKMRPSLMSPVVEAFKSLNANLPPTLTDSQVSSVRKSLKMQLIGLL
KNRGSFEFQNAIKKMLLDLGSSQSEISRATPKMDRQEVNLRQKRIVENAAHSLSKKMRLD
KDDSSSGAVSKDGTVIDLMEVDMVALEKNIETSTKINEKFIADNIKNSEIAVSLVLAFMK
HLPAEVPDVFFEEYVPVKDTPLPAQITKIASLLAFQMTEKKIGPGGSVFSKDYDTNDVEM
TDIPHEMDEQQRKEEATKKLRENMERVKGEQALLEHMKQRAKTLKLQEVTKPFPRATKAK
FLVDAVKRILSAERQCIVGGVSVKRRKILTVMAATFPDSVRVIIFDFIMMDIKGRIDLAF
SWLYEEYCLLQGFTRHSYVKSEHRPDYAYNELLNQIINGICTKCDFKDKLILLRRVYLEA
PLLSDESVNNLVQMCLSEDTGNYCVDLIKELTLLRPPRKLRFVRILLNFCVHEKSALREK
ALDHVRILYSENKVLPVKIEEFGKEWLNHLLKETPPPEIFGADYGRDTVEIAWKEDLAKI
CLGTILILLPYSENLLEDLCNVYTKTSPDLKRTILRSIEVPIKKLGVENPTLLKLIEECP
KGVETLVTRIIYILSESTIPTANLVKKVRDLYQTKVNDVRLLIPVLSGLTKAEILTALPK
LLKLNPIVVKEVFNRLLAIGTEYTNQKMPISPSEILVSLHTLDQNKCELKYVVKATSMCL
AEKDVYTQDILGACLQQLVDIVPIPTLFMRTVIQSLALYPRLSNFIIGLLQRLILKQVWK
QKVVWEGFLKCCQRLKPQSSSVLIQLPLPQLQDALNQCPDLRAPLLEYAESVEENQAGII
SQQTMDVLTGNALDVIITDDSGGFMMLENIKLEKEEPVEPFIPDHSQPLPPGED
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaatactcgggcgcacacaattcctgggtgagacatcgaatcttttcacagat
gaaaaaacggccacggctcgaaccagggttgttgaatggttcaatgaaatgatggtggcg
gaaccagccaccaaatgtgaactcctagccaaaatccaagaaattatattggcaacctgc
ccagagctgatagaagaatttctagaacacattctatcttttggtcatgatccccacaca
gatgtgcggaaacaaataatcggattcatggaacaaatatgcaaattaaaaccagaattc
atgccgcagattgtgaatgtcatatcaatgctccttcgagactcttcggcccaagtaatc
aaacgtgtcatacaggcatgtggttcaatttacaagaacggtttgaagtggatatgcact
cgagcagaaatcacagacagcactgaacaagcttggaatgttcttagtttagtcaaagct
cagatccttgacatgatcgacaacgacaacgatggtattcgtacaaatgctttaaaattc
ctcgaaggagtaatcattcttcagacctatcccgatgaagacagtcagaagcgagaagac
gacttttccttggaagatattccactcactttgaaaatcatgcgaagaaggaaactcgaa
gaggaagctatgaatattttcgatatcttgctaaagttccatgctgccactcatgtatcg
tctgtaaacttaatagcttgtaccggtagtctgagtactattgcgaaaatgagacctagt
ctcatgagtcccgtggttgaagctttcaagagtctcaacgccaatcttccacctactctc
accgattctcaagtcagctcagttcgaaagagtttaaaaatgcaactcattggattactg
aagaatagagggtcattcgagtttcaaaacgccatcaaaaaaatgttgctggatttgggt
tcgtctcaatcggaaataagtcgtgctactccaaaaatggacagacaagaagtgaattta
cgtcaaaaaagaattgtcgaaaatgctgcacacagtctgagtaaaaaaatgcgcctcgat
aaggacgattccagcagcggtgcggtttcaaaagacggtaccgtcattgatttaatggaa
gttgatatggttgcgttggagaaaaatatagaaacctcaactaaaatcaatgaaaagttc
attgcggataacataaaaaattctgaaattgcggttagcttggttttggcttttatgaag
catctgccggccgaagtacctgatgttttcttcgaggaatatgtacccgtgaaggacacc
ccgttgccagcacaaataacaaaaatcgcatccctattggctttccaaatgaccgagaaa
aaaattggtccaggtggatcagtcttttcaaaggactacgatactaacgacgtggaaatg
acggatatacctcatgagatggatgagcaacagcgcaaagaagaagcaaccaaaaagctg
cgtgagaacatggaaagggtgaagggggaacaagcattgctagaacacatgaagcagcga
gcgaaaacgcttaaactgcaagaggtgacgaaacccttccccagagcaacaaaagcaaag
tttttagtcgatgctgtgaagagaattttaagtgcagaacgccagtgcatcgtgggagga
gtttccgtgaagcgccgcaagattttaactgttatggccgccactttccccgacagcgtt
agagtaataatttttgattttattatgatggacatcaagggacgcatagacttggccttc
tcttggctctacgaagaatactgtcttctgcaaggcttcaccagacactcgtatgttaaa
tctgagcatcgtccagattacgcttacaatgagcttctcaaccaaatcatcaatggaatt
tgtacaaaatgtgatttcaaagataagttgattcttttgcggagggtttaccttgaggca
cctttgctgtcagatgaatctgtgaataatttggtgcagatgtgccttagtgaagatacg
ggcaattattgtgttgacctaataaaagagttgactcttctacgtcctccgagaaagctt
cgtttcgttcgaattttactaaacttttgtgtgcacgagaaatcggctttgcgggaaaaa
gcattggatcatgttcgcattttgtactcagaaaataaagtgcttccagttaaaattgaa
gaattcggaaaggaatggttaaatcatctgttgaaagaaactccaccacctgaaatattc
ggtgccgattatgggcgtgatacagtggagattgcctggaaggaggatctagcaaaaatt
tgcttgggaaccattttaatattgctgccgtattcagaaaatctacttgaagacctttgt
aatgtttacaccaaaacgtcaccagatcttaaacgcacaattttacgttctattgaagtg
ccaatcaagaagctgggcgttgaaaatccaacacttttgaaactaatcgaagaatgtccc
aaaggagttgaaaccttggtaacaagaataatttacattctttcagaaagcaccataccc
acagcaaatctagtgaaaaaagtacgcgatctctatcaaactaaagtcaatgatgttcgc
cttttgattcctgttctgagtggcttgaccaaggctgagattttaactgcactgccaaaa
cttctgaaattaaatccaattgtggtaaaagaagttttcaatagacttttggccattggc
acagaatatacgaatcaaaaaatgcctatatctccaagtgagatactagtttctcttcac
actctagaccaaaacaaatgtgagctgaaatatgttgttaaagcaacatcgatgtgtttg
gccgaaaaggatgtctacacgcaagatatacttggtgcttgtttgcaacagcttgttgat
attgtaccgattccgacgctcttcatgcgaacggttattcaaagcttggccctgtatcca
cggctgtctaattttatcataggactactgcaaaggttaattttaaaacaagtttggaag
caaaaagtcgtttgggaagggtttttaaagtgctgtcagagattaaagccgcagtcatca
tcagttcttatacaattgccattgcctcaattgcaagatgctctcaatcagtgtccggat
cttcgggctcctctccttgaatacgccgagtctgttgaggaaaatcaagctggtattata
tcccaacagactatggatgttttgactggaaatgctttagatgttattataacggatgat
tctggtggatttatgatgctagaaaatataaaactggaaaaggaggagcctgtcgaacca
tttattccggaccatagccaacctctgccaccgggtgaggactaa
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integrated database retrieval system
