Eupeodes corollae: 129944644
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Entry
129944644 CDS
T09463
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ecoe
Eupeodes corollae
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecoe01009
]
129944644
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecoe03019
]
129944644
04131 Membrane trafficking [BR:
ecoe04131
]
129944644
03036 Chromosome and associated proteins [BR:
ecoe03036
]
129944644
Enzymes [BR:
ecoe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129944644
Protein phosphatases and associated proteins [BR:
ecoe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129944644
Messenger RNA biogenesis [BR:
ecoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129944644
Membrane trafficking [BR:
ecoe04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129944644
Chromosome and associated proteins [BR:
ecoe03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
129944644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
129944644
NCBI-ProteinID:
XP_055910185
LinkDB
All DBs
Position
2:30279465..30296633
Genome browser
AA seq
1081 aa
AA seq
DB search
MNQNSPVVTRGGAQKAKIQTRAMLKSVEQRRPNATLQEAKRKAKLLKMQQQSQQEIVVKD
IFQNAMSAINSVQGYTGVIYDESMSEHRCLWDGNYPERPERFTRILERCKSLGLLDRCQR
IPSRRATKDEILLKHTDEHYELLKTTANMKDEAKLEDLSSQFDSIYLHPSTFDLSLLATG
CTIDLVENVVNGSLQNGMAIIRPPGHHAMKAEFNGYCFFNNVAIAAQYALDILKLQRILI
VDYDIHHGQGTQRLFYNDPRVLYFSTHRYDHGTFWPNIKESDFDAIGEGAGLGYNFNLPL
NQPGMTNSDYLAIYQQILIPVAVEFQPELIIVSAGYDAALGCPEGEMEVTPAFYPHLLNS
FVKLAQSKIAVILEGGYCLESLAEGAALTLKTLLGDPCPLYVEDLTPPCESVQDTILNCI
YAHRPFWRCLQIQQTYTMEELNNVNPQPDLHKVSRIFIGGPPLEERFPTRDCYPVQSPET
IQKLDARLQWLKAETNLSVPPVRVCYVYDEMMLEHQNMFEEGHPEQPKRIKTIYDMHFDY
GLLKRMEKLKSRHATTDEICLAHTRSHLNSMRRTGAKEELAAIGEKYNSVYFHPKTFECA
TLAAGSVLQVVDSVLKGESRSGVCIVRPPGHHAEPDVPQGFCIFNNIAIAAQYAIRDHKL
KRVLIVDWDVHHGNGTQHIFENNPNVLYISVHRYDNATFFPKSTDANYDVVGKGLGEGFN
VNIPWNKKGMGDAEYVLAFQQLIMPIAYEFNPELVLVSAGFDAAIGDPLGGCKVTPEAYG
LFTHWLSALANGRIIVCLEGGYNVNSISYAMTMCTKSLLGDPLPPISTPNISSKPSAAYS
SCIETIQNCLTVQQRYWNHLKFNKKLPECSGENNNEDFLSATLKNLNITSDDAQGAAGGS
IGKAPTPPPPLVDDEQQPGTSKPAEKVKTLKEFVSENLEALQNEEMFAVVPLKTCPHLSQ
LCPQDAPTIIDVTTPCFECSSTIENWLCLICAKTLCGRYVMEHMLYHNLESSHSLALSYS
DLSVWCYPCESYIDNSKLHVYKNLAHRNKFGVDMVWSYENEDVADNSDDDDESNYIVLHS
K
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaactctccggttgtaactcgcggaggagcacaaaaagctaaaatacaaacc
cgagctatgctaaaatcagtcgaacaacgacgtccaaacgcgacacttcaagaagcaaag
cgtaaagcaaagttgctcaagatgcagcaacaatcacaacaggagattgttgttaaagat
attttccaaaatgcaatgagtgcaataaactctgtgcagggttacactggggttatatat
gatgaatctatgtccgagcacagatgtctttgggatggaaactatccagaacgacctgaa
cgatttaccaggatattagaaagatgtaagtcgttgggccttcttgatcggtgtcaaaga
ataccttcgcgaagggcaacaaaagatgaaatccttctaaagcatactgatgagcattat
gaacttttgaagacaactgcaaacatgaaagatgaagcaaaactggaagatctaagttct
caatttgactcaatttacctgcatccgtcaacattcgatttgtcactcctagccactggt
tgtacaattgatttagtcgaaaatgttgtcaatggtagtctccaaaatggaatggcaata
ataaggccgcccggccatcatgccatgaaagctgaatttaatggatattgtttctttaac
aatgtggccattgcagcgcagtatgcattggatattctaaaacttcagagaatcttgatt
gtcgattacgatattcatcatggccaaggaacacaacgattattttacaatgatccaaga
gtcctttatttttcaactcatcgatacgatcatggaactttttggccaaatattaaagaa
tcagattttgatgcaattggtgaaggtgcaggcttgggatataattttaatcttccatta
aatcagccaggaatgactaatagcgattatttagctatttatcaacaaatcttaattcca
gttgccgttgagtttcaaccagagctcattattgtatcggcaggctatgatgctgctctg
ggatgtccagagggcgaaatggaagtgacacctgcattttatccccatctccttaattct
ttcgttaaattagcccaatctaaaatagcagtgattttggaaggtggttactgcctggaa
tcattagcagaaggtgccgctctaacactcaaaactttacttggagacccatgccctctt
tatgtggaagatctgacgccaccttgtgagagtgttcaggacacaattttgaattgcatt
tacgctcatcgtccgttttggagatgtcttcagatccagcagacgtacaccatggaagaa
ctaaataatgtgaaccctcagccagatttacataaagttagtcgaatttttatcggaggt
ccacctctagaagaaaggtttcccacaagggattgttatccagttcaaagtccagaaaca
atccaaaaactagatgcacgtttgcaatggcttaaagctgaaacgaatctttcagtgcca
ccggttagagtttgttatgtttatgatgaaatgatgcttgaacatcagaatatgttcgaa
gaaggtcatcccgagcaacccaagcgaattaagacaatttatgacatgcattttgattat
ggccttctaaaacgaatggagaaactaaaatcgcgtcatgcaacaacagatgagatatgc
ctggctcatactcgttctcatttaaattctatgcgtcgcactggtgctaaagaagaactt
gcggcaatcggtgaaaaatacaattcagtatacttccatccaaaaactttcgaatgcgct
actttggctgccggttcagtattacaagtagttgatagtgttcttaagggtgaatcgcga
agtggagtttgtattgttcgaccgcctggccatcatgctgaacccgatgtaccacaagga
ttttgtatatttaacaatatagctatagcggcacaatatgccatacgtgatcacaaactg
aagagagttctcattgtcgattgggatgttcaccatggaaatggtactcaacatattttt
gagaataacccgaatgttctatacattagtgtgcatagatacgacaatgcaactttcttc
cccaaaagcactgatgccaattatgatgttgtaggcaaaggactgggtgaaggcttcaat
gttaatattccttggaataaaaagggaatgggcgatgctgaatatgtacttgcattccaa
caattgatcatgccaattgcttatgagttcaatccagaacttgttttagtatcagctggc
ttcgatgctgcgattggtgatcctctgggcggttgtaaagtaacaccagaagcatatggc
ctgttcacacattggctttcagccctagcaaatggacgtattattgtgtgccttgagggt
ggctataatgtgaattcgatttcttacgctatgacaatgtgtacaaagtctttgcttggc
gatccattacccccgataagcacgccgaatatttcttctaagccctcggcagcttatagt
agttgtattgaaacaattcaaaactgtctaacggtgcagcagcgctactggaatcacctt
aagttcaacaagaaactacctgaatgttcaggagaaaataataatgaggattttctttct
gctacactgaaaaatttaaatattacttccgatgatgctcaaggcgctgcaggaggttca
attggaaaagctccaactccaccacctcctctagttgatgacgaacaacagccggggacc
agtaaacctgctgagaaggtaaaaactttgaaggaatttgttagtgagaatctcgaggca
ctgcaaaatgaagagatgtttgcggttgtgccgttaaagacttgtccacatttatctcaa
ttgtgtccacaggatgcaccgacaataatagacgtaactaccccatgctttgaatgctct
tccactatcgaaaattggttatgcttaatttgtgccaaaacactttgcggacgctatgtt
atggaacacatgttataccataatttagaaagcagtcattctttagcattaagttatagt
gatttgtcagtttggtgttatccgtgcgagtcttacattgacaatagtaaactgcatgta
tataaaaatttagctcatcgaaataaatttggcgttgatatggtatggtcttatgagaat
gaagacgtagccgataatagtgatgatgatgatgaaagtaattatatcgtgttacattct
aaatga
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integrated database retrieval system
