Eupeodes corollae: 129945596
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Entry
129945596 CDS
T09463
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129945596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecoe03019
]
129945596
Enzymes [BR:
ecoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
129945596
Messenger RNA biogenesis [BR:
ecoe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
129945596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
CbiA
MMR_HSR1
TniB
AAA_22
AAA_16
AAA_24
RsgA_GTPase
AAA_21
nSTAND3
Motif
Other DBs
NCBI-GeneID:
129945596
NCBI-ProteinID:
XP_055911399
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All DBs
Position
2:complement(111756352..111757966)
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AA seq
418 aa
AA seq
DB search
MEMDEETFTLESDSELRFEIEEKDAKVYVQLKSGFAEMFGTELVKKKSYEFVTGAKVAIF
TYQGCTIGVRGKTDVRYTSKETPMVQYLNCHAALEQMRTKAEENDTRGPIAMVVGPSDVG
KSTLCRILLNYAVRLGRRPLFADIDVGQASISIPGTIATVLIERPASIEDGFSQTAPLVF
HFGHKSPNDNKTLYTSIISKMAEVTLESLLNKRTKYSGMVINTCGWVKGEGYRHLLHTAQ
AFEVGAIFVLDQERLYNELLRDIPSFVKVVLLPKSGGVVERTKALRIDARDQRIKEYFYG
FRTPLYPFSFEVKWSDVKIFKIGAPPLPDSCMPIGMKAEDNLTKLVAVQPSPSLMHHLLS
LSFAESPEDDVISTNVAGFVCVTDVDTERQTLTILSPQPRPLPYSLLILSELQFMDSH
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggacgaagaaacttttactctggaaagcgactcagagctacgttttgaaatt
gaggaaaaagatgcaaaagtctatgtgcagttaaaatcaggctttgctgaaatgtttggc
acagaacttgtaaagaaaaaatcatatgaatttgtaaccggcgccaaagttgcgatattc
acctatcagggctgtacgattggagttcgtggcaaaacagacgttcggtacacgtccaaa
gagacaccaatggttcagtatctgaattgtcatgcagctctggaacaaatgcgtactaaa
gcagaagaaaatgacactcgtggccctatcgcaatggtagttggaccaagtgacgttggc
aagagtacgctttgtcgtatattgcttaactatgcagttcgcctgggtaggcggccactt
ttcgcagacatcgatgttgggcaagcatctatctcaatacccgggacaattgccacggtc
ttaatagaaagacctgcaagcattgaagatggattttcacaaacagcccctttggttttt
cattttggtcacaagagtccaaacgataataagacgttgtacacatctataatttcgaaa
atggctgaagtaacattggaatcgttgttaaataaacgcaccaagtactctggaatggtt
attaacacttgtggctgggtgaagggagaaggctaccgacatctgctacacacagctcag
gcctttgaagttggtgcaatctttgtactcgatcaagagcggctctacaatgagcttcta
cgtgatattccctcctttgtaaaagtggttctattgccaaaaagtggtggcgtggttgaa
cgtacgaaagccttgcgaattgatgctcgtgatcagcgaataaaggaatatttctatgga
ttccgaacacctctttatcccttttcgtttgaagtgaaatggagcgacgtgaaaatcttc
aagattggagcaccgccattgccagattcttgtatgccaataggaatgaaagcggaagat
aatctaaccaaattagtggcagttcagccgagtccctcacttatgcatcacctgttatct
ttgagttttgcagaatcacctgaagacgatgtgatttcaacgaatgtggctggcttcgtg
tgtgtgacggatgtggacacagaaagacagactcttaccatattatccccccaaccccga
ccattgccatatagtttgttaattttatcagagttacaatttatggatagtcattag
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