Eupeodes corollae: 129945624
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Entry
129945624 CDS
T09463
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129945624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecoe03041
]
129945624
Enzymes [BR:
ecoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129945624
Spliceosome [BR:
ecoe03041
]
Complex A
U2 snRNP components
U2 related factors
129945624
Complex B
129945624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
129945624
NCBI-ProteinID:
XP_055911440
LinkDB
All DBs
Position
2:complement(151741952..151745635)
Genome browser
AA seq
1093 aa
AA seq
DB search
MSKWSHSTRDRERERRRYSRSRSRSPNRERKRNDDYDRPRDDAKRPHTRDTRKREETKRR
RHSPPPRPRDNDGFRSRGSVNHQESSRDRDRDRERDRERERERDRDRHRDRDRQKERDRP
ERSNTSPAKEKVLEKVKVEVETKESPEKEIDKEEEQRQLELEMIKRRERIECWRAERKLK
ELEANKKDIKNLIIPTQANSKKWSLEDESDDEEDKDTKDIKEIKPLVPIAEEEPKPKEEE
GEAAANEETVKKEEETNDDIDPLDAYMQEVAKEVRKINNIVNPPTTDSSGVLIMTGMVKK
TNQDNSANKGELIEQNQDSLDYSSDDDLENIKDTAANLANKHKKELAKINHADVDYAPFR
KNFYVEVPELAKMKSHEVEKYRVELEGIQVKGKGCPKPIKTWAQCGVSKKEMDVLRKLNF
EKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPRMEDGDGPISIIMA
PTRELCMQIGKDIKRFSKALNLRAVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAA
NSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALAR
RILKKPIEVIVGGRSVVCKDVEQNVAILEDDAKFFKLLELLGVYQEQGSIIVFVDKQENA
DIVLKDLMKASYPCMSLHGGIDQFDRDSTILDFKSGKVRLLIATSVAARGLDVKDLILVI
NYDCPNHYEDYVHRCGRTGRAGNKGKAWTFLTPEQGRYAGDIIRALELSETPVPEDLKKL
WEDYKSSQEAEGKKVHSGGGFSGKGFKFDEQEANAAKESKKLQKAALGLADSDDDEDIEQ
DIDQQIEQLFAAKRNVKETSVAPVISVPAAATTTIATGAAASLGMPPSTNTSTTASTATA
MSIAAAGGSDKLELAKKLASKINTARNLTSDVKPAALQQAANELIMKGSQSQPMITARTV
VEQLAAKLNNKLNYQPKDDEEGLSPLQQSCFTKYEEELEINDFPQQARWKVTSKEALAQI
SEYSEAGLTVRGTYVPTGKNPPEGERKLYLAIESCSEMSVQKAKREITRLIKEELLKLSS
AHHVFNKGRYKVV
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatggtcgcattcaactcgtgatagagaacgggaacgccgtagatattctcga
agccgttcgcgctctcccaaccgggaacgcaaacgcaacgacgactacgaccggcctcgc
gatgacgcgaaacgccctcacactcgagacaccagaaaacgtgaagaaaccaaaagacgc
cggcattcaccgccgccaaggccaagagacaatgatggatttagaagtcgaggaagtgta
aaccatcaggaatcttctcgggaccgtgatcgggaccgcgagcgtgaccgtgaacgggag
cgtgaacgagatcgtgaccgccaccgtgacagagaccgtcaaaaggagagagatcgccct
gaacgctccaacacgtccccggcaaaggagaaagtgttggagaaagtcaaagttgaagtg
gaaactaaggaaagtcccgaaaaagagatcgacaaggaagaggaacagcgtcaattggag
ctggaaatgataaagcgtcgtgagcgcatcgaatgttggcgtgcagagcgcaaactcaag
gaactagaagccaacaagaaagacatcaaaaacctcataatcccaacgcaagcaaattcc
aagaaatggagtctcgaggacgagtcagacgacgaagaagacaaagacaccaaggacatc
aaagaaataaagcctctggttcccatagccgaggaagaaccaaagcccaaagaagaagaa
ggtgaagcagcagcaaatgaagaaaccgtgaagaaggaagaggaaaccaatgacgacatc
gatccattggacgcctacatgcaagaggtggccaaggaggtgcgaaagatcaacaacatc
gtcaatcccccaaccacagacagctcgggggttctgattatgacgggaatggtgaagaag
acaaatcaagacaacagcgccaacaaaggcgagctcatcgaacagaatcaggacagtctg
gattactccagcgacgatgacctggagaacatcaaggacacagctgccaatttggcaaac
aagcataagaaggaactggccaaaatcaaccacgccgacgtcgactatgctccgttcagg
aagaacttctacgtcgaggtcccggaattggccaagatgaagtcacacgaagtcgagaaa
taccgagtggagttggaaggcattcaagttaagggcaaaggatgtcccaagcccattaag
acttgggcccaatgcggagtgagtaagaaggaaatggacgtcctacggaagctgaacttc
gagaaacccactcccattcagtgtcaagccattccggcaatcatgagtggtcgagacttg
attggaatcgcgaagactggaagtggcaagactttggctttcatacttcccatgttccga
cacatcctcgaccaaccgcggatggaggacggagatggccccatctcgatcatcatggcg
ccaactcgagagctgtgtatgcaaattggcaaggatatcaagcgcttctcgaaggcgctg
aatctccgagctgtgtgcgtctacggagggacaggaatctccgagcaaatcgctgaactg
aagcgaggcgctgaaataatcgtgtgcactccaggacggatgattgacatgttggcggct
aactcgggtcgtgtgaccaaccttcggagagttacatacatcgttctggacgaggccgat
cggatgtttgacatgggtttcgagccacaagtgatgcggatcatcgacaacgtgcgtcca
gatagacagacggtgatgttcagtgccacattcccgcgtcaaatggaagccctggccaga
aggatcctcaagaaacccattgaggtgattgtgggaggtcgttcggtggtgtgcaaagac
gtcgaacagaacgtggctattctggaggacgatgcgaagttcttcaagttgctggagctg
ttgggagtgtatcaggagcaggggagtattattgtattcgtggacaaacaggaaaacgcc
gacattgtgcttaaagacctcatgaaggcctcctacccgtgcatgagtcttcacggtggc
attgaccaattcgatcgtgattcgactattcttgacttcaaatcgggaaaagttcggctt
ctgattgccacttctgtcgctgctagaggtcttgacgttaaggacctgattctagtcatt
aactatgattgccccaatcactacgaggattatgtccacaggtgtggacggacaggaagg
gcgggaaataaaggaaaagcttggacattcttaacgccagagcaaggtcgctatgctggg
gacatcattcgagcattggaactttcagaaaccccagttccagaggatttgaagaagctc
tgggaggattataagagttcccaggaagccgagggcaagaaggtgcacagtggaggtgga
ttcagtggcaagggcttcaagttcgacgaacaagaggcgaacgctgccaaagagagcaag
aaactccagaaagccgctcttggtttggctgattctgacgacgatgaggacatcgagcaa
gacatcgatcaacagatcgagcagttgtttgcagccaagcgcaacgtcaaggagacgtct
gtggctcctgtcatttcagttccagctgcggccacaacaacaatagcaacaggcgctgct
gcttcattgggaatgcctcctagcaccaacacaagcaccaccgctagcactgcaactgct
atgtccattgcagctgcaggtggttccgacaaattggagcttgccaagaaacttgcctcc
aagatcaacacagccaggaatctgacgagtgatgtaaaacctgctgcattgcagcaagca
gctaacgagctcatcatgaaaggctcccagtcccagccgatgatcacagctcgcacagtg
gtggagcagttagccgccaaactcaacaacaagctcaactaccagcccaaggacgacgaa
gagggtctgtcgccattgcaacaatcctgctttaccaaatacgaagaggaattggaaatc
aatgatttcccacaacaagccagatggaaggtcacctccaaggaggcactcgcccagatt
tccgagtactctgaggctggtctgactgtccgtggtacatacgtcccaacagggaagaat
ccacccgaaggggagcgaaagctgtacctggccatcgagagttgcagtgaaatgtcggtg
cagaaggcaaagcgagaaattacgagattgataaaggaagaacttctcaagctcagttca
gcgcatcacgtcttcaacaagggacgttacaaggtcgtgtaa
DBGET
integrated database retrieval system
