Eupeodes corollae: 129946227
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Entry
129946227 CDS
T09463
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129946227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecoe03041
]
129946227
03009 Ribosome biogenesis [BR:
ecoe03009
]
129946227
Enzymes [BR:
ecoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129946227
Spliceosome [BR:
ecoe03041
]
Complex A
U1 snRNP components
U1 related factors
129946227
Complex B
129946227
Ribosome biogenesis [BR:
ecoe03009
]
Eukaryotic type
Pre-60S particles
Helicases
129946227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-GeneID:
129946227
NCBI-ProteinID:
XP_055912319
LinkDB
All DBs
Position
2:134707453..134710135
Genome browser
AA seq
670 aa
AA seq
DB search
MPPQRNMSRGGGSSNGPRGGFGGGRNGDFGGGGGRGGGGGGGGGGGFGGGGGSGGGGFRD
RNDDRGGNRGGNRGFNRSGAGGGGGGFGGDRRGVRTGRVEKFGGRGERKSSKQNDFEPID
WSIVDLPPFQKDLYKEHPKTKNRPLHEVEKYRAENEITLRGPAPNPIQYFDEACFPDYCM
NQIRRSNYSAPTPIQAQGWPIAMSGFNMVGIAKTGSGKTLAFILPAIVHINAQPPLQRGD
GPIALVLAPTRELAQQIQSVANEFGSSSYVRNTCIFGGAPKQKQAYDLERGVEIVIATPG
RLIDFLLSGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIMSQIRPDRQILMWSATWPKEV
RQLAEDFLSDYIQINIGSLELSANHNIRQHVEICQESEKGTKLKQLLSNIYDAPSDPGKI
IIFVATKKKVDELFRYIGGFGVRCGAIHGDKSQSERDNVLGEFRHGRTNILVATDVAARG
LDVEGIKFVINFDYPQSSEDYIHRIGRTGRKHSSGTSYAFFTRKNVKNARGLIDVLREAN
QDINPQLEQLARSGGGGFGGDRKRFGGGGGFGGGGRGGGGGGRGFGGGGGGGGGGSRFGG
GGQRGENGGGNRFGGGGGGGSGGGFESGGGGGGGGMHRGFNGGQNGGRFNGGGGNNGGFD
GPRRNFPTRN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcagaggaacatgagtcgaggtggtggttctagtaatggccctagaggcgga
tttggcggtggaagaaatggtgactttggcggaggtggtggtcgcggtggcggcggtggt
ggaggaggaggtggtggcttcggtggtggaggcggaagtggtggcggtggtttccgtgat
cgcaatgacgaccgcggaggaaatcgtggtggaaatagaggtttcaatagaagcggagca
ggtggcggcggaggaggtttcggcggcgatagacgtggtgtacgtacaggacgcgttgaa
aaatttggcggtcgtggtgaaagaaaatccagcaaacaaaatgattttgaaccaattgat
tggtccattgtcgacttgccaccatttcaaaaagatctctacaaagaacatcccaaaacc
aagaacagacctctgcatgaagttgaaaaatatcgagcagaaaacgaaatcaccctcagg
ggccccgctcccaatccaattcagtacttcgatgaagcctgcttcccagattattgcatg
aatcaaatccgccgcagcaattactcagccccaacacctatccaagctcaaggttggcca
atagccatgagcggatttaatatggttggtattgcaaaaacgggatctggcaaaacgcta
gccttcattctgccagcaattgttcatatcaacgctcaaccgcccctccaacgaggagac
ggtcccattgcactggtacttgcaccgactcgcgaactggcacagcaaatacagtcggtt
gccaatgaatttggttcttcttcctatgttaggaacacgtgcatctttgggggtgctccc
aaacaaaaacaagcctacgatcttgaacggggtgttgaaatagttattgccactccgggg
cgcctcattgactttcttctcagcggaactaccaatttacgtcgttgcacgtatctggtt
ttggatgaagccgatcgtatgcttgacatgggattcgagccacagataagaaaaatcatg
agtcaaattcgaccggatcgacagattctcatgtggagtgccacctggccgaaggaagtt
cgccagttggccgaagatttcctcagcgattatattcaaatcaacatcggctcgttggag
ctctctgcgaatcataacatccgtcagcacgttgagatatgtcaggaatcggagaagggc
accaaactcaaacagcttctgtcgaatatctacgatgcccccagtgacccgggaaagata
ataatatttgtggccaccaagaagaaggtcgacgagctctttaggtacattggaggcttt
ggggtgcgttgtggcgctatacatggcgataaatctcaatcggaacgtgataatgtgctg
ggcgagttcaggcatggcagaacaaatatactggtggccacagacgttgctgcccgcggt
ctagacgttgaggggatcaagtttgttatcaatttcgattacccacagtcgtcggaggac
tatatccatcgtattgggcgaacgggacgtaagcattccagcggtacatcttacgctttc
tttaccaggaaaaatgttaagaacgcccgaggtttgattgatgtgctgcgagaagcgaac
caagatattaacccacagcttgaacaattggcaagatctggcggaggtggctttggcgga
gataggaaaagatttgggggaggtggtggctttggtggaggtggccgtggtggaggcgga
ggcgggagaggtttcggtggtggtggcggcggcggcggaggaggatctaggtttggtggt
ggaggacagagaggtgagaatggtggtggcaatagatttggtggtggtggtggtggtggt
agcggtggtggctttgaaagtggtggcggtggaggtggcggaggaatgcatcgaggtttc
aatggcggacaaaacggtggccgattcaatggcggaggtggcaataatggagggttcgat
ggaccacggagaaactttcccactagaaattag
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