Eupeodes corollae: 129947606
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Entry
129947606 CDS
T09463
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129947606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecoe03041
]
129947606
Spliceosome [BR:
ecoe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
129947606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
PRP4
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EML
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
WD40_like
Nha1_C
MYO6_lever
WDR54
Motif
Other DBs
NCBI-GeneID:
129947606
NCBI-ProteinID:
XP_055914210
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Position
2:137578673..137580567
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AA seq
524 aa
AA seq
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MSDDEDISYVKRTKTIHYGSLEETERNRQATLEDIESDEDAYESSNAAVIAPVEQKKPQP
PAAPPSAKIDDDYYDIEAEVSKDKLALLEEFERKRRARQINVSTDDAEIKKNLRQLNEPI
CYFGEGPAERRRRLKELLASLGENAIKQKQTEEEERKQLQKEQETTWYHEGPESLRISRF
WIADYSLPRAKQRLEKARSILELPSATRAGRMVELQKRLQSLAPLCSQVGDTRPVSDCAF
SEDSTMMLTSSWSGLCKVWNVPDCDLRQTLRGHASYVGGVAFRPKVSVDDSNVVSMASCG
HDGAVKLWCFGSEESIADITGHMPHRVSKLSFHPSGRFLATACYDSSWRLWDLEQRTEVL
HQEGHAKAVHCLAFQTDGSVIVTGGLDAFGRVWDLRTGRCIMFLEGHLGSIFGVDFSSNG
YHIATGSQDNSCKIWDLRRRQPLYTIPAHTNLISDVKYEPDGGNFLVTSSYDCTTKIWSN
KTWQPLKTLLGHDGKVVSVDIANNSQYIATTSFDRTFKLWTPEG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgatgaagatatttcatacgttaaacgcacaaaaaccatacattatggatcc
ctagaagaaaccgaacgtaaccggcaagctactctagaagacatcgaatccgatgaggat
gcatacgaatcgtcaaatgctgctgttattgctcctgttgaacaaaagaaaccccaacct
ccagctgcaccgccctcagctaaaatagacgatgattactatgatatagaagcagaagtt
tccaaagataaattggcgctattagaagaatttgaacggaagcgtcgagcgcgccaaatt
aatgtaagtactgatgacgccgagattaagaagaatttgcggcagctaaatgagcctatt
tgttatttcggcgaaggacctgcggagcgccgacgtcgattgaaggagttgcttgccagt
ttgggggagaatgccatcaagcaaaaacaaaccgaagaggaggaacgtaagcaactgcaa
aaagaacaagaaacaacgtggtaccatgagggacccgagtctctgaggatatcccgattt
tggatcgcagactactctctaccgcgtgccaaacagcgcctcgagaaggccaggagtata
cttgagctcccgagtgcaacgagggctggtcgaatggtagaactgcaaaagcgactgcag
tccctggccccgctttgcagtcaagttggtgacactcgcccagtgagtgattgtgcattt
agtgaagattcgaccatgatgttgacttccagttggtcaggtttatgcaaggtctggaac
gttccagactgtgatctgaggcagacccttcgtggacatgccagttatgtgggaggagtg
gccttccgtccaaaagtcagtgtggacgattctaatgtggtttctatggcttcgtgtggt
catgatggtgctgtcaagctctggtgctttggcagtgaggagtccatcgccgacatcact
ggacatatgcctcacagagtctcaaaattgtcattccatccttcgggacggttcctcgca
acagcatgctacgactcctcgtggcggctgtgggacttggaacaaagaaccgaagttctt
catcaggaaggacacgctaaagccgtgcactgcctggcatttcaaactgatggcagtgtg
attgtgaccggcggcctggatgccttcggtcgtgtttgggatttgcgaactggtcgctgc
atcatgttcctcgaaggccatctgggatcgatatttggtgtggacttctcatcgaatggc
tatcatattgccaccggaagtcaagacaactcatgcaaaatctgggatctacgaagaaga
cagcccttatatacgattcccgcccataccaaccttatatcggatgtaaaatacgaacca
gatggcgggaacttcttggtcacaagcagctatgattgtactacaaagatttggtcaaat
aaaacatggcaaccattaaagacacttttaggacacgacgggaaggtagtaagtgtggat
attgcaaacaactctcaatacattgcgaccacatcgttcgataggacttttaagctgtgg
actccagaaggctga
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