Eupeodes corollae: 129948585
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Entry
129948585 CDS
T09463
Name
(RefSeq) collagen alpha-2(IX) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
ecoe
Eupeodes corollae
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecoe04147
]
129948585
00535 Proteoglycans [BR:
ecoe00535
]
129948585
00536 Glycosaminoglycan binding proteins [BR:
ecoe00536
]
129948585
Exosome [BR:
ecoe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129948585
Proteoglycans [BR:
ecoe00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
129948585
Glycosaminoglycan binding proteins [BR:
ecoe00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129948585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
129948585
NCBI-ProteinID:
XP_055915669
LinkDB
All DBs
Position
2:139537406..139942605
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AA seq
910 aa
AA seq
DB search
MAMVISGRAKAVITALISFFLLGIVLVTGSTKGWFVQQRYHGERVAARIQATDDNGSGFP
PPPINSPPPAFRGPKGEKGERGIKGPPGDSIRGPPGPPGPPGPKGEAGPYAPYVDFPTSM
DGIFNGKCTCNASDILEALKDSETLRESIRGPPGLPGKEGKTGAPGLTGATGVPGERGAP
GPKGDRGDRGDPGARGPEGLQGKKGEPGLDGMPGVAGPPGPAGPPGLPDNYDESLMVNSM
PGLRTSTPGPKGDAGEKGDIGQQGERGQPGPKGERGTAGASGAKGDRGHPGPHGPGGIKG
EPGQPGLPGLSGPPGATGLKGDRGMPGDIGPVGPAGPPGTVIYTDTQMNTTQCTCPAGPP
GSMGPRGSTGSQGATGEPGPAGPAGLTGLPGIKGEKGERGLKGSAGSKGDRGPEGPPGQA
FFGGEGMMLNGTKGEKGEKGMRGRHGKQGPSGPIGPPGVPGLPGEMGHPGRTGLKGESGQ
KGQKGDFGGKEGMKGDKGDRGDDGRTGSPGPPGLPSATPPIPGPPGPPGPPGPPGMPGIS
IVGPKGDPGMEYRSFGRVDGRSPLDEIKAIRELQNLKDYPESTAGPPAGRQDELPSSASS
TSSNMRFVPGALTFANIEEMTKKSAMSPAGTIAYITEEEALLVRVNKGWQYIALGSLLPI
AVPAPPTTLSPPARPDLQSSNLLNNLPQPLESGPHFTISPEYETWYPRMLRIAALNEPHS
GNIEGIHRADFQCHRQARKAGLVEEAFRAFLSARTQHIYSIVRESDRNLPVVNTRGDVLF
SSWMSIFNGQGGFFSQAPRIYSFSGKDVLTHPQWSQKVVWHGSHLNGELAQEMYCDAWMS
SSMDKVGYASSLLGNKLIDEETYSCNNQFIILCIEVVPKNQRRKRELDSERRGRNFETAE
EYAEYLKNIT
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggtaatatcgggtcgggcgaaagctgttatcacagctctgataagtttcttc
cttcttggtattgtattagtgaccggttcaacaaaaggatggttcgtacaacaacgttat
cacggcgagagagttgctgctaggatacaggcgacagacgataatggaagtggattccca
ccaccaccaatcaactctccacctcctgctttccgaggaccaaagggtgaaaaaggtgaa
cgaggtattaaaggaccaccaggtgatagtatacgtggtccaccaggaccacctgggcca
cctggtccaaaaggcgaagctggtccatatgcaccctatgttgactttccaacgtcaatg
gatggtatatttaacggaaagtgtacatgtaatgcgtctgatatcctagaagcactaaaa
gacagcgaaacactgcgtgaatcaatacgaggaccacccggtttaccgggtaaagaagga
aagacaggtgctcctggactcacgggtgctactggggtaccaggtgaacgcggtgccccc
ggtcctaagggcgaccgcggcgataggggcgatcctggtgctcgtggtcccgagggtctt
cagggcaagaagggtgagcccggcttggatgggatgcctggagtggcaggtccacccggt
ccagctgggccacccggtcttccggataactacgatgaatcactgatggtaaattctatg
cctggactaaggacgagtacacctgggccgaagggtgatgctggtgaaaaaggtgacatc
ggccaacagggagaacgaggccagccaggcccaaagggcgagcgtggtacagcgggagca
tccggcgcaaaaggtgacaggggtcatccggggccacatggcccaggaggcatcaaaggt
gagccaggtcaacctggtttgcctggactttccggaccaccaggtgcaactggacttaag
ggagacagaggtatgccgggagatattggacctgtggggcctgcgggtcctccaggcaca
gtcatttacacagacacacagatgaacaccacacagtgcacatgtccggcgggtcctccg
ggctccatggggccgagaggctctacgggttcacagggtgcgacgggagaaccagggccg
gctggaccggccggtctcacaggtctgccaggtataaaaggagaaaaaggagaacgggga
ctgaaaggcagtgctgggtcgaagggcgaccgaggaccagaaggaccacccggacaagcg
ttcttcggaggcgagggcatgatgttgaatggcaccaaaggtgaaaagggtgagaaaggc
atgcgtggcagacatggcaaacagggacctagtggcccaatagggccacctggcgttcct
ggccttcccggagaaatgggacatcctggacgcactgggctcaagggtgaatcaggccaa
aagggacaaaaaggtgatttcggtggcaaagaagggatgaaaggagataaaggagatcga
ggtgatgatggaagaacgggctcccctggtccaccgggattgccatcagcaacaccacca
atacctggaccaccaggtccaccggggccacctggaccacctggtatgcctggcatttcg
atagttgggccaaaaggtgatccaggtatggaatatcgaagttttggtcgagtagatgga
cgatcgccgttagatgaaatcaaagcgattcgagaacttcaaaaccttaaggattatcct
gaaagtactgccggaccaccagcaggaagacaggatgaactgccctcatcagcgtcgtca
acatcatcgaatatgagatttgtaccaggtgctttaacattcgctaacattgaagaaatg
accaagaagtcagctatgagtcctgccggaacgatagcctacataacagaggaagaagcg
ctcctagtgcgggtaaacaaaggatggcagtacattgcgctgggaagtttactgccaata
gctgtgccagctccaccaacgacgttatcgccaccagcaagaccggatttgcaatcatca
aatctcctaaacaatctaccccaaccactggaaagtggtccacactttacaatatcaccg
gaatatgaaacgtggtatccccgaatgcttcgtatcgcagcactaaatgagccacattct
ggcaacatcgaaggcatacatcgtgccgacttccagtgtcacagacaggcgagaaaagct
ggccttgttgaagaggcattcagagccttcctctctgcgagaacacaacatatttattca
atagttcgagagagtgatcgcaatctgccggttgtgaatacacgaggagatgtcctcttt
agttcctggatgagtatattcaatggacaaggtggattcttttcgcaagcacctcgaatt
tacagtttcagtgggaaggatgtactaactcatccgcagtggtcacaaaaagttgtttgg
catggatcgcatctaaatggcgaactagctcaggaaatgtattgtgatgcatggatgtca
tcatccatggacaaggtcggttatgccagcagtctgctggggaataaattaatagacgag
gaaacgtactcctgcaataatcaatttattatcctatgcattgaagttgtgccgaagaac
caacgaaggaaacgagagcttgactctgaaagaagaggacgaaactttgaaacggcagaa
gaatatgctgaatatcttaaaaatatcacttga
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