Eupeodes corollae: 129949660
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Entry
129949660 CDS
T09463
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129949660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecoe03021
]
129949660
03019 Messenger RNA biogenesis [BR:
ecoe03019
]
129949660
Transcription machinery [BR:
ecoe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
129949660
RNA polymerase I system
129949660
Messenger RNA biogenesis [BR:
ecoe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
129949660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
Spt5-NGN
KOW6_SPT5
KOW5_SPT5
KOWx_SPT5
KOW2_Spt5
Spt5_N
KOW7_SPT5
KOW1_SPT5
CTD
PAS_6
Motif
Other DBs
NCBI-GeneID:
129949660
NCBI-ProteinID:
XP_055917223
LinkDB
All DBs
Position
3:complement(69965967..69974153)
Genome browser
AA seq
1090 aa
AA seq
DB search
MSDSEASNMSDSGSEDGSMASNKSQHSARSRSVSRSRSPSRSRSRSRSKSAGSRSRSRSA
SAGSGSGSDVGVNRRRQRSRSRDDEEEGEEEQEPEGEDLDSEEYDEEEDDEVGPKKKKKK
ERFGGFIIDEAEVDDEVDEDEEWEEGANELGIVGNEIDELGPTARDIEIRRRGTNLWDTQ
KEDELEEYLRKKYADESVAKRHFGDGGEEMSDEITQQTLLPGIKDPNLWMVKCRIGEEKA
TALLLMRKYLTYLNTDEPMQIKAVVAPEGVKGYIYIESYKQTHVKSAIENVGNLRVGKWK
QEMVPIKEMTDVLKVVKEQVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRI
DYTRMRGALRTTQSEADNAKRKKKRRPPAKPFDPEAVRAIGGEVHSDGDFLLFEGNRYSR
KGFLYKNFTMSAILAEGVKPTLAELERFEEQPEDVNLEIAAASKDDPTASHSFSMGDNVE
VCLGDLENLQAKIIAIDGGMITVMPKHQDLKDPLIFKANELRKHFKTGDHARVLAGRYEG
ETGLIVRVEPTRIVLVSDLTMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDPQNV
GVIVRLERENFHVLNMHGKVIECKPTALQKRRENRNTIALDAEENQIRRRDIVKVMEGPH
AGRSGEIKHLYRSLAFLHCRMYTENGGIFVCKTRHLQLAGGNKSQANTMGSLGGMGFMSP
RIQSPMHPSGGRGGRGGGRGGRGGFRVTRDRDIVGKTIKICGGSYKGSVGIVKDATESTA
RVELHTSCQTISVDRNHIAIVGVPGKEGGSVSTYGRTPARTPGYGSQTPVYAAAGSKTPL
LGSQTPTWDSEGRTPYSGAMTPSHDGSMTPRHGAWDPNITNTPARNNDYDYSIEEPSPSP
GYNPSTPGYQVSTPFAPQTPGTVYGSDRSYSPYNPSPAPSPYPVGYMSTPSPSSYSPNTP
GGAPQSPYNPQTPGASLDSHMGDWCTTDIEVKIHTHDDADLVGQTGIVRTVSNGVCSVFL
RKEDRSVSIISEHLAPVPPEVDDDFKVIYGDDRELTGKVISVSDKDTSICKINGDVTMIP
TSHLCKMKVD
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattccgaggcgagtaatatgtcggatagtgggtcggaagatggaagtatggct
tctaacaaatctcagcacagcgcaagatctcgctcagtatcgcgttcaagatctccctcg
cgttctagatctagatcccgttctaagtccgcaggttcccgatcgagatctcgctcagca
tctgctggatctggatcgggttcggatgtaggcgttaatcgccgtcgtcagagaagtcga
tcgcgtgatgacgaggaggaaggagaagaagaacaagagccggagggagaagacctggac
tctgaggagtatgatgaagaagaagatgacgaagttggcccgaagaaaaagaaaaaaaag
gagagatttggaggtttcatcattgatgaagcggaagtggacgacgaggttgacgaagat
gaagaatgggaagaaggagccaatgaattaggaattgttggtaatgaaatcgacgaactg
ggaccaacggccagggatattgaaataagacgacgcggaactaacctctgggatacccaa
aaagaagacgaactagaggaatatcttcgcaaaaaatacgccgatgaatctgttgcaaaa
aggcattttggtgatggtggtgaggaaatgtccgatgaaattacccaacaaactttgctt
cctggaataaaggatcctaacctgtggatggttaagtgtcgcattggtgaagaaaaagcc
acagcgctcttactgatgagaaaatatttaacttatttgaatactgatgaaccaatgcag
attaaagcagttgttgctccggaaggagtcaagggttacatttatattgagtcttacaag
cagacgcatgttaagagtgcaattgaaaatgtgggtaatcttcgtgtcggaaagtggaaa
caggagatggtaccaatcaaggaaatgactgatgtactaaaggttgttaaggaacaagtt
gggttaaaggttaagcagtgggttaggttgaagcgtggtttgtataaggatgatattgct
caagttgattacgtcgacttggcacaaaaccaagtgcatttaaagcttttgccacgaatt
gattatacacgaatgagaggagccctcagaacaactcaaagtgaagctgataatgctaaa
cgtaagaagaagcgtcgtccaccagctaagccatttgatccggaagcagtgcgtgcaatt
ggaggtgaagttcattcagatggtgactttttgcttttcgaaggaaaccgttattcgcgt
aaaggttttctttataaaaattttacaatgtcagctattttggccgaaggtgtcaagccc
actcttgccgaattggaaaggtttgaggaacaaccagaagatgttaacttggaaatcgct
gccgcttcaaaagatgatccaacggcatctcattcgttctccatgggagacaatgttgaa
gtttgtttgggtgatttggaaaatttacaagctaaaatcatagcaatcgatggaggcatg
atcacagtaatgccaaagcatcaggatcttaaagatcctttaattttcaaggcaaatgag
cttcgaaaacattttaagaccggagaccacgctcgtgttctggccggtcgttatgaaggt
gaaacaggtttgattgttcgcgttgaaccaacacggattgtactagtttctgacttaaca
atgcatgagttggaagtgcttcccagagatttgcagttgtgttccgatatggcaacaggt
gttgattcattgggacagtttcagtggggagatttagtacaactagatcctcagaacgtt
ggtgttattgttcgtttggaacgtgaaaatttccatgtacttaatatgcatggtaaggtt
attgaatgtaaaccaacggcgttgcagaaaagacgagaaaaccgtaacactattgcacta
gatgccgaagagaatcaaattcgtcgcagagatatagttaaggtcatggaagggccacat
gcaggtcgctcaggagaaattaaacacttgtatcggagtttggcattcttacactgccgt
atgtacactgaaaatggaggaatttttgtgtgcaagacacgccacttgcaattagctgga
ggcaacaaatcccaggccaacacaatgggatccttaggtggtatgggattcatgtcacct
agaattcaatcacccatgcatccctcgggaggacgaggaggacgcggaggtggccgaggc
ggaagaggaggtttccgtgtgaccagagatcgcgatattgtaggaaaaactataaaaatc
tgtggtgggtcgtacaagggttcagttggtattgttaaagatgcaactgaaagcacagct
cgtgtagaattgcacacttcgtgccagacaatttcagttgaccgtaaccacattgctatt
gttggagttcctggcaaagaaggaggcagtgtttccacttacgggcgcactccagcccgc
acacctggttatggctcacaaactccggtttatgcagctgcaggatctaagacgccattg
cttggtagtcaaactccaacttgggattccgagggtcgtacaccttatagtggtgctatg
actccgtctcatgacggcagcatgactcctcgtcatggtgcctgggatccgaatattacg
aatacaccagcaagaaacaatgattatgactatagcatagaagaacctagtccaagtcca
ggttacaatccaagtacgcccggctatcaagtcagcacaccatttgctccacaaactccg
ggaactgtctatggttcggacagaagttacagcccttacaatccaagcccagctccttct
ccttatccagtcggttatatgagcactccatctccatcgagctattctcccaatacccct
ggcggcgctccacaatcgccatataatccccagactccaggagccagtttggactcccat
atgggtgactggtgtaccacagacattgaggtaaaaattcatactcatgatgatgccgac
ttagttggacaaactggtatcgttcgaactgtttcaaatggcgtgtgctccgtgttctta
cgtaaggaagatcgcagtgtttcgatcataagtgaacatttggcacccgtgccacctgaa
gtcgacgatgatttcaaagtaatttatggagatgatcgcgaattgactggaaaagtaata
tcggtttctgataaggacactagcatttgcaaaataaatggcgatgtcactatgataccc
acatcccatctttgcaaaatgaaagttgactaa
DBGET
integrated database retrieval system
