KEGG   Eupeodes corollae: 129949679
Entry
129949679         CDS       T09463                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
ecoe  Eupeodes corollae
Pathway
ecoe03018  RNA degradation
ecoe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecoe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129949679
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129949679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecoe03019]
    129949679
   03041 Spliceosome [BR:ecoe03041]
    129949679
Messenger RNA biogenesis [BR:ecoe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     129949679
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     129949679
Spliceosome [BR:ecoe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    129949679
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 129949679
NCBI-ProteinID: XP_055917246
LinkDB
Position
3:65784811..65785876
AA seq 153 aa
MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDSQVKSRNRAEMNKSRGGGGGGGANNQNQRGRPGNRNNF
GNRNVAGGPNSGSRPTSQGNRPLASGVKNNRKQ
NT seq 462 nt   +upstreamnt  +downstreamnt
atgttgccgctttctcttcttaaaacagcccaaagtcatcccatgttggtagaacttaaa
aatggtgagacatacaatggacatcttgtgagctgcgattcatggatgaatataaactta
cgggacgtcatttgtacctcaaaggatggagatagattttggagaatgccagaatgttat
attagaggaagcactattaaatacttgcgtatcccagatgaagtaattgatatggtcaaa
gaggattctcaggttaagtcgagaaatcgcgccgaaatgaataaaagtcgagggggtggt
ggaggtggaggagctaataaccaaaaccaacgcggtcgccctggcaaccgtaataacttt
ggcaaccgcaatgtggcaggtggaccgaacagcggttccaggccaacatcacaaggtaat
agacctcttgcttccggcgttaaaaacaacagaaagcaatag

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