Eupeodes corollae: 129949816
Help
Entry
129949816 CDS
T09463
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129949816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecoe03041
]
129949816
Spliceosome [BR:
ecoe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129949816
Complex C
U5 SnRNP specific factors
129949816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_HPS5
Cytochrom_D1
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
129949816
NCBI-ProteinID:
XP_055917450
LinkDB
All DBs
Position
3:complement(110472350..110473706)
Genome browser
AA seq
347 aa
AA seq
DB search
MGTKRVSNSMVLAQDNKRSKHDIAVYTNRDKALLETGVQRTSNLSASIMLLEGHQGEIYT
CEFHPDGELLMSSGYDRQIYIWGVYGECENIMAMSGHTGAVMEAHFSTDGSNIYTCSTDK
TLAIWDIVTGTRIRRLKGHTTFVNSVHGTRRGVQMLCSGSDDRTVRIWDARKKFPAQTFE
SNYQVTATCFNDTGEQVISGGIDNEIKIWDIRRNDIVYKLRGHMDTVTGISLSPDGSYLL
SNSMDNTLRIWDIRPYVSGERCVKIFNGNQHNFEKNLLRCAWSADGSKISAGSSDRHVYI
WDTTSRRILYKLPGHNGSVNDVDFHPKEPIILSASSDKNMFLGEIED
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggggaccaaacgtgtatcaaatagtatggtattagctcaggacaacaagcgctcaaaa
catgatattgctgtgtacacaaaccgggacaaggctttgctagaaacgggagtacaaaga
acttccaacttatctgcatcgattatgctgctcgaaggccatcaaggtgaaatatatacc
tgtgaattccatccagatggagaactccttatgtcgtccggatatgatagacaaatatat
atatggggagtctatggtgaatgtgagaacataatggccatgtctggccatactggagct
gtgatggaagctcatttctccacagacggttcaaacatctacacctgctctacggacaag
actcttgccatctgggatattgtaactgggacgagaatacgccgtctgaagggtcacact
acttttgtaaattcggtgcatggtacacggaggggtgtccaaatgttatgctccggttca
gatgatcgtactgtgagaatctgggatgctcgtaaaaagtttccggcacaaactttcgaa
agcaactatcaagttactgcaacttgtttcaatgacactggtgaacaagttatctcagga
ggaattgacaatgaaataaaaatctgggacattcgacgaaatgatatcgtctataagttg
agaggtcacatggatacagttactggaatatccttgtctcctgatggttcatatctttta
tcgaattcaatggacaacactttgcggatttgggatattcgtccgtatgtttcgggtgag
agatgtgtcaaaatcttcaacggaaatcaacataattttgagaagaatctactgagatgt
gcatggtcagcagatggcagcaagatatcggctggttcttctgatcgtcatgtgtacatt
tgggatacaacaagtcgtcgaattttgtacaagttgccgggtcataatggcagtgtgaat
gacgtagatttccatcccaaagaacccatcatcctgtccgcatcgagtgataaaaatatg
tttttgggtgaaatagaagattaa
DBGET
integrated database retrieval system
