Eupeodes corollae: 129949909
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Entry
129949909 CDS
T09463
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03018
RNA degradation
ecoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129949909
09123 Folding, sorting and degradation
03018 RNA degradation
129949909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecoe03019
]
129949909
03041 Spliceosome [BR:
ecoe03041
]
129949909
Messenger RNA biogenesis [BR:
ecoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129949909
mRNA degradation factors
5'-3' decay
Lsm complex
129949909
Spliceosome [BR:
ecoe03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129949909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
RIF2_lid
Motif
Other DBs
NCBI-GeneID:
129949909
NCBI-ProteinID:
XP_055917607
LinkDB
All DBs
Position
3:complement(108626906..108627622)
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AA seq
112 aa
AA seq
DB search
MENKGKTQGGNDNKEKRRKESILDLSKYLEKMIRVKFAGGREAAGVLKGYDALLNLVLDN
TVEYLRDVDEPFKLAEETRSLGLVVCRGTALVLICPQDGMESIPNPFISQDA
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaaggaaagactcaaggaggtaatgacaacaaagaaaaacgccgcaaggag
tccatcctcgatctgtccaagtatctggagaaaatgattcgcgtcaaattcgctggaggt
cgagaagctgctggtgtccttaagggttacgatgcccttctcaacttggtcctggacaat
accgtcgaatacctgcgagacgtcgatgaacccttcaaattggccgaggagacacgcagt
ctgggtctggttgtttgccgggggacggcattggtactaatctgccctcaagatggtatg
gaatccattccaaatcctttcatctcacaagatgcatag
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