Eupeodes corollae: 129950040
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Entry
129950040 CDS
T09463
Name
(RefSeq) TBP-related factor
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129950040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoe03000
]
129950040
03021 Transcription machinery [BR:
ecoe03021
]
129950040
Transcription factors [BR:
ecoe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
129950040
Transcription machinery [BR:
ecoe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129950040
RNA polymerase III system
TFIIIB
129950040
RNA polymerase I system
SL1/TIF-1B
129950040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
HV_Gp350_C-term
Motif
Other DBs
NCBI-GeneID:
129950040
NCBI-ProteinID:
XP_055917790
LinkDB
All DBs
Position
3:85258996..85260035
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AA seq
227 aa
AA seq
DB search
MNIPDFNSPNKTMTSKPVGLVSPNINKANPHLSIVPSAPVIPVGPKDALHEVKIQNVVAT
VSVACELNLQDINFRTRNSEYNPSRFHGVVMRMREPRCTALIFRTGKIICTGARNEAQAH
LGARKFARILQKLGYCVKFNDFKMQNIVATVDLRFPIRLENLNQVHGQFSSYEPELFPGL
IYRMVKPRMVLLIFVNGKIVFTGAKAKKDIMDCLEIIYPILQSFRKN
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaatattccggacttcaattccccaaacaaaaccatgacttcaaagcccgtaggtctc
gtgtcgccaaacatcaataaggccaatcctcacttatcgattgtcccatcagctccagta
attccagtaggacccaaggatgctctccatgaagttaaaattcaaaatgtcgtggcaact
gtgtcggtagcatgtgagttaaatcttcaggacatcaacttcaggacccgcaattcggag
tataatccctctagattccacggtgttgtcatgcgaatgagagaaccccgatgtacagcc
ttgatatttcgtacgggaaaaataatttgcacaggagcacgcaatgaagcccaagcgcat
ttaggagctcgtaaattcgctagaatactccaaaaactcggctattgtgttaaatttaat
gactttaaaatgcaaaacatagtggcgaccgtagacttgcgttttcccattcgattggaa
aatctaaatcaagttcatggtcaatttagttcatatgaaccggaattgtttcccggattg
atttatcgtatggtcaaaccaaggatggtactactaatatttgtaaatggaaaaattgtt
ttcacaggggcaaaggcaaaaaaagatataatggactgtctggaaatcatttatcctatt
ttacaaagttttcgtaagaattag
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