Eupeodes corollae: 129950331
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Entry
129950331 CDS
T09463
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129950331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecoe03019
]
129950331
03012 Translation factors [BR:
ecoe03012
]
129950331
Enzymes [BR:
ecoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129950331
Messenger RNA biogenesis [BR:
ecoe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129950331
Translation factors [BR:
ecoe03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129950331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_C
OB_NTP_bind
HA2_N
AAA_19
PhoH
nSTAND3
ATPase
AAA_14
ResIII
AAA_22
Cas3-like_C_2
AAA_7
T2SSE
ABC_tran
Rad17
NB-ARC
SRP54
AAA_11
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
129950331
NCBI-ProteinID:
XP_055918201
LinkDB
All DBs
Position
3:complement(107829120..107841101)
Genome browser
AA seq
939 aa
AA seq
DB search
MHSNRGNRSRGGPRHPPGLKGRDIGLYYRNLHKNNKPNPEERRTELGPNVGLPTRTLTEI
NKLLQNYEHESDVSQVSREFEKRFNNLLGKNFTEFVSSKYNLEELKISNNPTFNEKVRLE
FEEQKNHEVYRNRLNARKSLPATQQQNMILDAINSNQIVLIVGSTGCGKTTQIPQFVLDH
FIETGRGSMCQIVCTQPRRISAITVAERVAYERNENLGKSVGYSIRLQGISPRPNASILY
CTTGTLLRCMESDPLLYSLTHIILDEIHERSVETDMLMGLLKKIIPYRKDLKVVLMSATI
SQSDFQRYFDGCCTIEIEGTLFDVEDRYLEDVLQETGFRNFETQRKPTRHGRFSKNNDSK
KVAEFQSMIEPYARAIRNKYDRHVLDSIRNPSSEEFNLELVEDLIFYICAKKPPGAILVF
LTGFDKISKLTAALESSRRYSRNKHQIFTLHSSMPTIDQKSVFNRPPNGVRKIIISTNIA
ETSVTIDDVVYVINCGKIKSTDYDVELNLQTLGEKWVTLANAQQRRGRAGRVQPGICYNL
YTRARERFLEAVPSPEIVRTKLEGVILNLKFLHINDVAEFMKTLLDCPNEKAIQLGITLL
KRINALDENETITPLGMHLAHLPVDPQMGKMILMGALFRCVDPITTVASSISYKDPFYLP
LGKEKQVDQAKKRLSNNLKSDHLMVVNVLDEYRRAQQHHAERNFCYDHFVSHSVVSQLET
MKKQFCELLKDSRFTESSDPRRKDLNVNSCNYTLLRAVIAAGLYPNAAHIRKLRLIKNRV
QPIISMSTPTDRSVKFHPTSINSTESSFDSHYFTYFLKRKSANVCLLDSTMIFPMALIIF
GDGIKCGVNDRGSTFVSVADYFYFKSDSATNELITKLRHFLGLLLQKKALYPSPIDFNSK
DEILINAIKILLSHDEAILFEEDIDDFNDGEYDEDFDED
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcattcaaatcgaggaaatcgatctcgaggcggtccccgccacccaccaggactaaaa
ggtcgtgacattggcttatattacagaaatttacacaaaaataacaaaccaaatccagaa
gaaagacgaaccgaactaggtcccaatgttggactacccacacgaactctcaccgaaatc
aacaaattgttgcaaaactatgaacacgaatcagatgttagccaagtttctagagaattt
gaaaaacgtttcaataacttgttgggcaaaaactttaccgaatttgttagcagtaaatat
aatttagaagaattgaaaatttccaacaatcccacttttaatgaaaaagtaagactagaa
tttgaggaacagaaaaatcatgaagtctatcgaaatcgtttgaatgcaaggaaatccctg
ccagcaacacaacagcaaaatatgattcttgatgccatcaattcgaatcagattgttctt
attgttgggagtactggttgtggtaagacaacacaaattcctcaatttgttctggatcat
tttatagaaacgggcagaggttcaatgtgtcagattgtctgcacacaacccagaagaata
tcagcaataaccgttgccgaaagagttgcctacgaaagaaacgagaatcttggcaaatct
gtgggatattctataagattacaaggcatttctccccgtccaaacgcatcgatattgtat
tgtaccaccggaaccctattgcgctgtatggaaagtgatcctcttctctattcgctgacg
catataattctagacgaaatccacgagaggagcgttgaaacagacatgctcatgggactt
ctaaagaagattattccctatagaaaagacttaaaagttgttcttatgagtgcaacaatt
tcacagagcgatttccaaagatatttcgatggttgttgcaccatagaaatagaagggacg
ctctttgacgttgaagatagatatctggaggatgttcttcaggagacaggttttaggaat
tttgaaacccaaagaaaacccactcgacatggcaggttctctaagaataatgattctaaa
aaagtcgccgaattccaatcaatgatagaaccctacgcccgagccataagaaacaaatac
gatcgtcatgttcttgactctattcgcaatccatcttcagaagaattcaatcttgaactc
gttgaagatttaatattctacatttgtgcgaagaagccacctggtgctattttagtattt
ctcacaggtttcgataagatttccaaactaactgcagccctcgaaagttctagacgttat
agtagaaataaacatcagatattcacgttacactcatcgatgccaaccatagatcaaaaa
agtgtcttcaatcgtcctccgaatggagtaagaaaaattataatctcgacgaatatagcc
gagacttctgtgacaattgatgatgttgtttatgttataaattgtggtaagatcaaatca
accgattacgatgtggaattgaatttgcaaactctgggagaaaaatgggtaactttggcg
aatgcccaacaacgacgaggtcgtgctggtcgcgttcaaccaggaatttgttataattta
tatactagagctcgtgaacgttttttagaagccgtcccttcacctgagatagttcgcacc
aaacttgaaggtgtaattttaaatcttaagtttttacatatcaacgatgttgcggaattt
atgaaaacacttttagactgtcccaatgaaaaagctattcaattaggaattactttactt
aaaagaattaacgcattagatgaaaatgaaaccattactccacttggcatgcacttggcc
catttaccagttgatcctcaaatgggtaaaatgattctaatgggagctctttttcgttgt
gttgatcctattacaacagttgcttcatcaatttcttataaggatccattttatttacca
ttaggtaaggagaaacaagtggatcaagcaaagaaacgtctttcgaataatttaaaaagt
gatcatttgatggttgtgaatgttttggatgaatatcgaagggcacagcaacatcatgcg
gaaaggaatttttgctatgatcattttgtatcccattcagttgtttcacaattggagaca
atgaagaaacagttttgtgaattacttaaagattcaagatttactgaatcatctgaccct
cgaagaaaagatcttaacgtcaactcatgtaattatacacttctaagagctgtgatagct
gcaggtctttatccaaatgctgctcatataaggaaactgcgactcatcaagaatcgagtt
caaccaataatatcaatgtcaacgcctacagatcgcagtgttaagtttcatccaacttca
ataaatagtacagaatcttcatttgattcacactattttacatattttttaaaacgtaaa
tcagcgaatgtctgtttattggattcaacaatgatatttccaatggctttgataattttt
ggagatggtattaaatgtggtgtgaatgatagaggaagtacatttgtgtcggttgctgat
tatttttattttaaaagtgattcagcaacaaacgaattgattaccaaacttcgtcacttc
cttggactactcttacaaaagaaagccctctatccatcgccaattgatttcaatagcaaa
gatgaaattttaattaatgcgataaaaatactactttctcatgatgaagctattctattt
gaagaggatattgatgatttcaatgatggagaatatgacgaagattttgatgaggattaa
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