Eupeodes corollae: 129951145
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Entry
129951145 CDS
T09463
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03013
Nucleocytoplasmic transport
ecoe03015
mRNA surveillance pathway
ecoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129951145
09122 Translation
03013 Nucleocytoplasmic transport
129951145
03015 mRNA surveillance pathway
129951145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecoe03019
]
129951145
03041 Spliceosome [BR:
ecoe03041
]
129951145
Enzymes [BR:
ecoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129951145
Messenger RNA biogenesis [BR:
ecoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129951145
Spliceosome [BR:
ecoe03041
]
Complex C
Other components
EJC/TREX
129951145
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129951145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
MoaE
AAA_19
Motif
Other DBs
NCBI-GeneID:
129951145
NCBI-ProteinID:
XP_055919134
LinkDB
All DBs
Position
3:112089488..112095841
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AA seq
423 aa
AA seq
DB search
MADNDDLLDYEDEEQTETTVAETTEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHTRE
LAFQISKEYERFSKYMPSVKVGVFFGGLSIQKDEDNLKSVTPHIVVGTPGRILALIRSKK
LNLKHLKHFILDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFMQ
DPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFLKSVQRCMALA
QLLTEQNFPAIGIHRGMNQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKILNEVQDRFDVNITELPDEIDLSSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaatgacgatcttttagactacgaagatgaggaacagaccgaaaccaccgtc
gccgagaccacagaagcaccaaagaaagatgtaaagggtacatatgtatcaattcatagc
tccggttttagagatttcttgctgaagcccgaaattttgcgtgctattgttgattgcggt
tttgaacatccttctgaagttcaacacgaatgcattccccaagctgttttaggtatggat
attttatgtcaagcgaagtcaggtatgggaaagacagctgtattcgttttggccacactt
caacaattagaaccaactgaaaatgttgtctatgttttggttatgtgtcacaccagagaa
cttgcattccaaatcagcaaagaatacgaacgtttctcaaagtacatgccatctgttaag
gttggtgtcttcttcggcggtttatcgattcaaaaagacgaagacaacttaaagagtgtt
acaccacacatcgtcgtaggcacacccggaagaattcttgctcttattcgcagcaaaaaa
cttaacttgaagcatctcaagcatttcatcctcgatgagtgtgataaaatgttggaacag
cttgatatgcgtcgcgacgtgcaggaaatcttccgcagtacaccacacggaaaacaagtc
atgatgttttctgcaacacttagcaaagaaattcgtccagtctgcaagaaatttatgcaa
gatcccatggaagtttatgtcgatgatgaagctaaactaactttgcatggtttacaacag
cattatgttaagttgaaggaaaacgagaagaacaaaaaactctttgaattgctcgatgtt
cttgagttcaatcaggttgtaatattcttgaaatccgttcaacggtgcatggcgctagca
caattgttgacagaacagaatttcccagctattggaattcatcgaggtatgaaccaagag
gagcgtttgtcgcgttatcaacagttcaaagatttccagaagagaatcttggtagcaaca
aatctattcggacgaggcatggatattgaacgtgttaatattgttttcaactatgacatg
ccagaagactctgatacctacttgcatcgtgtggcacgtgctggacgtttcggtacaaag
ggtttagccatcacatttgtttcagatgaagctgatgctaaaatcctaaacgaagttcaa
gatcgttttgacgtaaatattacagaactgcctgacgaaattgatctatcatcttacatc
gaaggaagataa
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