Eupeodes corollae: 129951967
Help
Entry
129951967 CDS
T09463
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
KO
K12857
Prp8 binding protein
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129951967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecoe03041
]
129951967
Spliceosome [BR:
ecoe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129951967
Complex C
U5 SnRNP specific factors
129951967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_IFT122_1st
NBCH_WD40
eIF2A
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_HPS5
WD40_like
Ge1_WD40
PEP5_VPS11_N
Beta-prop_Nup120_160
Beta-prop_IP5PC_F
KNTC1_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
129951967
NCBI-ProteinID:
XP_055920340
LinkDB
All DBs
Position
3:complement(110490922..110492377)
Genome browser
AA seq
341 aa
AA seq
DB search
MAAKRLPSVPGFIQTHKRSKLEGIGRTVIAGILRTSSLPSPIIRLEDHQGAINSCKFHPL
GELVMSAGYDKQIYIRCVYGDTGGVMTMTGHRGTITETQFSPDGSTVYSSSLDDSVALWD
TATGARLKFLEGHRSEVNTVQSSRTSNHTICSGSNDGTIRLWDTREAHAVQMFNSGYQVL
ASCFNDRGDHIMSGGVDNCIKIWDLRKNEIVSILIGHEDMISGMALSPSGNYLLSNSLDN
TLRIWNMRPFMHLDRCVDSFIANQSMTEPNLLRCAWSRDSKCIAAGSSDQHVYIWDVMSR
QKVCELEGHETSVIDIDFHPIEPILVSGSSYENLYLHELQS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaacgtcttcccagtgttccaggatttattcaaactcacaagcgatcaaag
ttggaaggaattggtcgaacagttatagcgggaatcctaagaacttcaagtttaccatca
ccaattatacgactcgaggaccatcaaggcgcaattaattcttgcaaatttcatcctttg
ggtgaacttgtcatgtcagctggatatgataaacaaatttatattcgttgtgtttatggt
gacactggtggtgttatgaccatgactggccatagaggtaccattacggaaacgcagttc
tcaccagatggaagcacagtgtatagtagttccttggatgattccgtagcactgtgggac
acagctactggagctcgacttaaattccttgaaggtcatagatccgaagttaacactgta
caaagcagtaggacttccaaccacactatttgctctggttctaacgatggaacaatcagg
ctgtgggacactcgtgaagctcatgcagttcagatgttcaatagtggctaccaagttctg
gcgtcttgtttcaatgacagaggcgatcacatcatgagtggtggggtggataattgtatc
aaaatttgggaccttcgtaagaacgaaattgttagtatattgattggacacgaagatatg
atatctggaatggcactttcaccttccggaaattatctgctgtcaaactcactggacaat
actcttcgcatttggaatatgcgtccatttatgcatctcgaccggtgcgtggattctttt
atagcaaaccaatcaatgacggaaccgaatcttttgcggtgcgcttggtccagagatagc
aaatgtattgctgctggatcttcagaccaacatgtttatatttgggatgtcatgagccgt
caaaaggtgtgtgagctagaaggccatgaaaccagtgttattgatattgactttcatccg
atagaaccaatacttgtatctggctcaagctatgagaatctatatttgcacgaattacag
agctga
DBGET
integrated database retrieval system
