Eupeodes corollae: 129952183
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Entry
129952183 CDS
T09463
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129952183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecoe03041
]
129952183
Enzymes [BR:
ecoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129952183
Spliceosome [BR:
ecoe03041
]
Complex C
Other components
Step II factors
129952183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_30
Motif
Other DBs
NCBI-GeneID:
129952183
NCBI-ProteinID:
XP_055920622
LinkDB
All DBs
Position
3:68112794..68119318
Genome browser
AA seq
1259 aa
AA seq
DB search
MDELKILEHLSLVSKICTELDNHLGINDKDLAEFIIDLAEKNRTFDSFKKVLLENGAEFP
DSFVTNLLRIIQLMKPSDNSDVETNIVGDKRSKLTQLFPGLAIPNEKVRSDAEDDEDEEE
NDEANNTDTIVDDAMAELEALAPSNLAKQKETKIEKKSSRRSTTRSISRDRTREKSQSRS
RDRAKRHRSKSRDRRQRSRSRDRKRSRSRNRRRSKSRDRNRSRSKDRRRSRSRNRRSRSR
DKNQKSKNRDKSRERKSRRSSSRDRHRSRRSRSTDRHRRSDRDRSQQREKRRSPTPMPDD
PEPGKVYTAKVANIVPFGCFVQLFGLRKRWEGLVHISQLRSEGRVTDVTEVVNRGSMVKV
KVISITGQKVSLSMKEVDQVSGEDLNPLSHAPTKDQDLRDRNPDRPIGGTSMLQLQGNVD
NEDDESRKRVTRISSPERWEIKQMISSGVIDRSELPDFDEETGLLPKDEDDEADIEIEIV
EEEPPFLAGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQREQEMDSIP
TSLNKNWIDPLPEEDSRALAANVRGVGLAPVEVPEWKKHVIGGKKSSFGKKTDMTLVEQR
QSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLAECGFTARGKIGCTQPRRVA
AMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLMEFDLKSYSVI
MLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTF
PVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGP
DVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQ
KVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQR
TNLATTVLQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAE
FPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQSLADQKKAKFNQAEGDH
LTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKNTVR
IQKAICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVVYHELVQTTKEYM
REVTTIDPKWLVEFASSFFRFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggatgaattaaagattctagaacatctttccttggtatcgaaaatctgcacggaatta
gacaaccatttaggcatcaacgacaaagatttggctgagttcataatcgatttggctgaa
aagaataggactttcgattcctttaaaaaagttcttcttgaaaatggggcagagtttcca
gattcttttgttacgaatttgctgcgtattattcaattgatgaaaccttcagacaactct
gatgtggaaaccaatatagtgggtgacaaaagaagcaaattgactcaactattccctgga
cttgccattcctaatgaaaaagttagatcagatgcagaggatgatgaagacgaggaagaa
aatgacgaagcgaataacacggacacaattgtggacgatgctatggcagaactggaagcg
ttagcacccagtaaccttgcaaaacaaaaggaaacaaagattgagaaaaaatcttcacgc
agaagcacaaccagatccatttcacgtgatcgcacgcgtgaaaaatcacaaagccgctca
agagacagagcaaagagacacaggagtaagtcaagagaccgaagacaaagaagcaggtcg
agagataggaagaggagtaggtcgaggaatcgtaggcgaagtaaatcgagagatagaaac
cgaagtagatctaaagatcgacgccgaagccgttcgaggaacaggcgcagtcgatcccgc
gataaaaaccaaaagagcaaaaatagagataaatctagagaacgaaagtcgcgccgcagc
tcgtcaagagaccgccatagaagtagacgttcgagatccacagatcgtcatagaagaagc
gacagagatcggagtcagcaaagggaaaagcgacgcagtccaactccaatgcctgatgac
cctgagcctggaaaggtttacacagctaaggtggcaaatattgtgccatttgggtgtttt
gttcaattgtttggcttgcgcaaacgttgggaaggtctagttcacatatcacaattacgt
tcggagggccgtgtgactgatgtaacagaagtagtgaaccgaggttcaatggttaaagtc
aaggtcatatcgattaccggccaaaaggtatctttgtctatgaaggaagtcgatcaagtt
tctggtgaagacttgaatcctttgtctcatgctccaactaaagatcaagatctaagagat
cgaaatccagatcgtccgattggtggaacatcaatgctacaattgcaaggaaatgttgac
aacgaagatgacgaaagtcgtaaaagggttacccgaatatccagccctgaaagatgggaa
atcaagcaaatgatctcctcgggagttatagaccgcagtgagttgcccgattttgatgaa
gaaactggtttgctaccaaaagacgaagatgatgaagctgacattgaaatcgaaatagtc
gaagaagagccaccatttcttgcaggccacggaagagctttgcatgatctgtcacctgtt
agaatcgtcaagaaccccgatggttcactagcacaagcagccatgatgcagtcggctttg
gctaaggagcgcagagaacaaaaaatgcttcaacgtgaacaagaaatggactcaataccg
acaagtttaaacaaaaactggattgatcctttaccagaagaggatagtcgcgcccttgct
gccaatgttcgtggtgttggattagctcctgttgaggtacctgagtggaaaaaacacgtt
attggtggtaaaaagtcgtcatttggaaagaaaacagacatgacacttgttgaacaacga
caatcgcttcctatttataaacttcgagatgacttgattaaggctgtaactgacaaccaa
attcttattgtcattggtgagactggatctggcaaaactactcaaataacacaatacttg
gctgaatgtggatttactgctcgtgggaaaattggttgcacacaaccgcgtcgtgttgct
gcaatgtctgtggctaaacgcgtcgcagaagaattcggttgtcgactaggacaagaagtg
ggttatacaattcgtttcgaagattgtacaagtcctgaaactgtcataaaatacatgaca
gatggtatgctgctacgtgagtgtcttatggaattcgacttaaagtcttactcagttatt
atgttggatgaagctcacgagagaacgattcacactgatgtgctctttggcttacttaaa
actgctgttcaaaaacgtccagaattgaaactcatcgtaacttcagcaactttggatgct
gtaaagttttctcagtatttctttgaagcacctatatttactattcctggcagaacgttc
cctgttgaagtcctatacacaaaggaacccgaaacagattaccttgatgcatcgctgata
accgtaatgcaaattcacctaagagagccaccaggcgatattcttctgtttctcactggt
caagaggaaatcgatacagcatgtgagatactatacgaacgcatgaaaagcctcggtccg
gatgtacctgaattgataatactgccagtctactctgcattgccatcagaaatgcagact
agaattttcgatcctgcgccggcaggaagtcgcaaagttgtaattgcgacaaacattgca
gaaacatctctcaccattgatggaatatattatgtcgtagatcctggctttgtgaaacaa
aaagtatataattcaaaaaccggaatggattctttggtggtaacaccaatttctcaagca
gctgctaaacaaagagcagggcgtgctggtcgtaccggtcctggcaagacctacagatta
tacacagaacgtgcctatcgtgatgaaatgttaccaactccagttccggaaatacagcgt
accaatctggcgactactgttttgcagcttaaaactatgggtatcaacgatttactgcat
tttgactttatggacgctcctccagtagaatcattggtaatggccctagagcaacttcat
tcactctcggcactcgatgatgaaggtcttcttacacgactaggtcgacgaatggctgaa
ttcccccttgaaccaaatctctccaaaatgctaattatgtcggtggccctgcaatgctca
gatgaaattctgactatagtgtccatgttgagtgtgcaaaacgtattctacagaccaaag
gacaagcaatcattggccgaccaaaaaaaagctaaattcaaccaagccgaaggtgatcac
ttgacacttttggctgtctataacagttggaaaaataataaattttcgaacgcctggtgt
tacgagaattttgtccagataagaaccctcaaacgatcacaggatgtacgcaaacagttg
ttgggtattatggacagacataagttggacgttgtctcggctggtaaaaatactgtgcga
atacaaaaggcaatttgttcaggtttcttccgaaatgccgcaaaaaaagatccccaagaa
ggttatagaactttggttgactcacaagttgtgtatattcatccttcaagtgcgctattc
aatcgacaacccgaatgggttgtttatcatgaacttgttcagacaaccaaggagtacatg
cgcgaagtgaccacaattgatccgaagtggctcgttgaatttgcttcctcattctttaga
ttctccgatccgactaagcttagtaagtttaagaaaaatcaacgtcttgaaccgttgtat
aataaatatgaagaaccaaacgcatggagaatatcaagagttcgtcggagaagaaattaa
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integrated database retrieval system
