Eupeodes corollae: 129952192
Help
Entry
129952192 CDS
T09463
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03040
Spliceosome
ecoe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129952192
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129952192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecoe03041
]
129952192
04121 Ubiquitin system [BR:
ecoe04121
]
129952192
03400 DNA repair and recombination proteins [BR:
ecoe03400
]
129952192
Enzymes [BR:
ecoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129952192
Spliceosome [BR:
ecoe03041
]
Complex B
Other components
Prp19 complex
129952192
Complex C
Prp19-CDC5 complex
129952192
Ubiquitin system [BR:
ecoe04121
]
Ubiquitin ligases (E3)
U-box type E3
129952192
DNA repair and recombination proteins [BR:
ecoe03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
129952192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_Vps41
NBCH_WD40
WDR90_beta-prop_4th
U-box
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Tricorn_2nd
Beta-prop_WDR35_TULP_N
Cytochrom_D1
zf-Nse
PROPPIN
Beta-prop_VPS8
Beta-prop_ACSF4
CoV_NSP15_N
Motif
Other DBs
NCBI-GeneID:
129952192
NCBI-ProteinID:
XP_055920642
LinkDB
All DBs
Position
3:68154194..68161068
Genome browser
AA seq
504 aa
AA seq
DB search
MALVCAITNEVPETPVISPQSGAIFEKRIIEKYIAENGCDPITGKEIKVDELIEIKTPPI
VKPKPPSATSIPATLKTMQDEWDALMLHSFTQRQQLQIARQELSHALYQHDAACRVVSRL
TKEVAAAREALATLKPQAGIATPSTIPQPAIAAEAAGVATQPIEQAGMSAEVIQKLQDKA
TVLTQERKKRGRTVPEELITQDQIKTFLTVASHPGLHSASVPGILALDINSADHSKILTG
GNDRNATVFNKDTEQVVAILKGHTKKITKVIYHPDEDTVITASPDMCIRIWNVPTSQTQL
LLRCHDGPVTGLSLHPTGDYVLSTSSDKHWAFSDIRTGRLLTKVMDTAEVGLTTAQFHPD
GLIFGTGTDDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAADDACVKLWDL
RKLKNFKTIQLEDGYEVKDLCFDQSGTYLAIAGTDVRIYLCKQWQDLKVFNDHTALATGV
RFGKHAQYLASTSMDRTLKLYAIE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggctttagtttgtgctattacaaacgaagtgccagaaacaccagttatttcaccacaa
tctggagcaatatttgaaaagcgaataatcgaaaaatacatagccgaaaatgggtgcgat
cctattacgggaaaggaaatcaaagtagacgaactaattgaaatcaagacaccgccaatt
gtcaagcctaaacccccaagcgccactagcattccggctactttgaagacaatgcaagat
gaatgggatgccttgatgttgcactcattcactcaacgacagcaattgcaaatagctcgt
caagaacttagccatgctctttatcagcatgacgcagcttgtcgtgtagtttcgaggcta
acaaaagaggtggctgcagccagagaggctttggcaacgctaaagcctcaagctggaatt
gcaacaccttcgactataccacagcctgcaattgctgctgaagcagctggcgttgctact
caaccaattgaacaagctggaatgagtgcagaggttattcagaaacttcaagacaaggcg
accgtcctgacgcaagaacgcaagaaacggggtagaacagtgccagaagaactcatcacc
caggatcagattaaaactttcttgactgtagcttcacatccaggactgcactcggcatct
gtgccaggtattctagctctggacattaatagtgctgatcatagtaagatccttactggg
gggaatgataggaatgcaactgtcttcaataaagacaccgaacaagttgttgctattctc
aagggacatacaaagaagattaccaaggttatataccatcctgatgaagatactgttata
acagcttcccctgacatgtgcattcgtatatggaacgttcccaccagtcagacacaacta
ttgttgcggtgtcatgatggtcctgttactggcctatcgcttcacccaactggcgactat
gtcctttcaacatcttcagacaaacactgggcattttccgatattcgaactggaagactt
ctgactaaggtgatggacacagctgaagttgggctaacaacggcacaatttcatccggat
ggactgatttttggaacaggaacagatgattctcaagttaaaatctgggatttaaaagaa
caaagcaacgttgccaatttccctggacatactggaccaatttctgcaatttcattctct
gaaaatggttattatttagccacagccgcagacgatgcttgtgttaaactatgggattta
cgcaaactgaagaactttaaaacaatacaattggaagatggttacgaagtcaaggatctg
tgctttgatcaaagtggaacttatttggcaatcgcaggaactgatgtcagaatttattta
tgtaaacaatggcaagatttgaaggtttttaacgatcatacagcacttgcgacaggcgtg
cgttttggaaaacatgcccaatatcttgcatcgacaagcatggaccgtactctgaaactg
tatgctatcgaataa
DBGET
integrated database retrieval system