KEGG   Eupeodes corollae: 129952192
Entry
129952192         CDS       T09463                                 
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
ecoe  Eupeodes corollae
Pathway
ecoe03040  Spliceosome
ecoe04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ecoe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129952192
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129952192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ecoe03041]
    129952192
   04121 Ubiquitin system [BR:ecoe04121]
    129952192
   03400 DNA repair and recombination proteins [BR:ecoe03400]
    129952192
Enzymes [BR:ecoe01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     129952192
Spliceosome [BR:ecoe03041]
 Complex B
  Other components
   Prp19 complex
    129952192
 Complex C
   Prp19-CDC5 complex
    129952192
Ubiquitin system [BR:ecoe04121]
 Ubiquitin ligases (E3)
  U-box type E3
   129952192
DNA repair and recombination proteins [BR:ecoe03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    129952192
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_Aladin ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_Vps41 NBCH_WD40 WDR90_beta-prop_4th U-box Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Tricorn_2nd Beta-prop_WDR35_TULP_N Cytochrom_D1 zf-Nse PROPPIN Beta-prop_VPS8 Beta-prop_ACSF4 CoV_NSP15_N
Other DBs
NCBI-GeneID: 129952192
NCBI-ProteinID: XP_055920642
LinkDB
Position
3:68154194..68161068
AA seq 504 aa
MALVCAITNEVPETPVISPQSGAIFEKRIIEKYIAENGCDPITGKEIKVDELIEIKTPPI
VKPKPPSATSIPATLKTMQDEWDALMLHSFTQRQQLQIARQELSHALYQHDAACRVVSRL
TKEVAAAREALATLKPQAGIATPSTIPQPAIAAEAAGVATQPIEQAGMSAEVIQKLQDKA
TVLTQERKKRGRTVPEELITQDQIKTFLTVASHPGLHSASVPGILALDINSADHSKILTG
GNDRNATVFNKDTEQVVAILKGHTKKITKVIYHPDEDTVITASPDMCIRIWNVPTSQTQL
LLRCHDGPVTGLSLHPTGDYVLSTSSDKHWAFSDIRTGRLLTKVMDTAEVGLTTAQFHPD
GLIFGTGTDDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAADDACVKLWDL
RKLKNFKTIQLEDGYEVKDLCFDQSGTYLAIAGTDVRIYLCKQWQDLKVFNDHTALATGV
RFGKHAQYLASTSMDRTLKLYAIE
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggctttagtttgtgctattacaaacgaagtgccagaaacaccagttatttcaccacaa
tctggagcaatatttgaaaagcgaataatcgaaaaatacatagccgaaaatgggtgcgat
cctattacgggaaaggaaatcaaagtagacgaactaattgaaatcaagacaccgccaatt
gtcaagcctaaacccccaagcgccactagcattccggctactttgaagacaatgcaagat
gaatgggatgccttgatgttgcactcattcactcaacgacagcaattgcaaatagctcgt
caagaacttagccatgctctttatcagcatgacgcagcttgtcgtgtagtttcgaggcta
acaaaagaggtggctgcagccagagaggctttggcaacgctaaagcctcaagctggaatt
gcaacaccttcgactataccacagcctgcaattgctgctgaagcagctggcgttgctact
caaccaattgaacaagctggaatgagtgcagaggttattcagaaacttcaagacaaggcg
accgtcctgacgcaagaacgcaagaaacggggtagaacagtgccagaagaactcatcacc
caggatcagattaaaactttcttgactgtagcttcacatccaggactgcactcggcatct
gtgccaggtattctagctctggacattaatagtgctgatcatagtaagatccttactggg
gggaatgataggaatgcaactgtcttcaataaagacaccgaacaagttgttgctattctc
aagggacatacaaagaagattaccaaggttatataccatcctgatgaagatactgttata
acagcttcccctgacatgtgcattcgtatatggaacgttcccaccagtcagacacaacta
ttgttgcggtgtcatgatggtcctgttactggcctatcgcttcacccaactggcgactat
gtcctttcaacatcttcagacaaacactgggcattttccgatattcgaactggaagactt
ctgactaaggtgatggacacagctgaagttgggctaacaacggcacaatttcatccggat
ggactgatttttggaacaggaacagatgattctcaagttaaaatctgggatttaaaagaa
caaagcaacgttgccaatttccctggacatactggaccaatttctgcaatttcattctct
gaaaatggttattatttagccacagccgcagacgatgcttgtgttaaactatgggattta
cgcaaactgaagaactttaaaacaatacaattggaagatggttacgaagtcaaggatctg
tgctttgatcaaagtggaacttatttggcaatcgcaggaactgatgtcagaatttattta
tgtaaacaatggcaagatttgaaggtttttaacgatcatacagcacttgcgacaggcgtg
cgttttggaaaacatgcccaatatcttgcatcgacaagcatggaccgtactctgaaactg
tatgctatcgaataa

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