Eupeodes corollae: 129952245
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Entry
129952245 CDS
T09463
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8
KO
K18734
protein SMG8
Organism
ecoe
Eupeodes corollae
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecoe03019
]
129952245
Messenger RNA biogenesis [BR:
ecoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
129952245
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
129952245
NCBI-ProteinID:
XP_055920717
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All DBs
Position
3:81995642..82006228
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AA seq
537 aa
AA seq
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MAFFETWVYPNDPPKACETLFQDERKLVIVGVIGKSAFPDCNKMAGLNVLHSHPSHLNYE
SNEGEIRFYYSKSEDVLFLHFQTTYDEYCMRDAMVKEMENSQYGRHLNFNQYVRNRFAKM
LLFATQVCHIVVFVELSVTFDSSLISIFKSLKLIRERHVLKFLPKLMKSSSAYLGKGYRV
CSPRCLFFFENYPDGYDKTEESISKLEFEIEDNIYKMFRNELIIPNKSGTPLFSLPGNKR
FVYYNTDDKIREDPLLQTLHELQCSFEKNSYFKDDTKSNLEELRLFGGFGIPLAQNVDAV
IEEQPKRNNFMNFLKDHIKEALQFGFDDGVSKFKSKNNFLVPTVRTWYETFKLFHNIFVE
NFDNPNYEPADPSYKFFLESFEKLMDIDEGFFSKCCENGIKKACNLYNNPVLSHYGKSFQ
NALIDEALSVYSAHARGPNVDKSEQKLVDNFEQCWIAEKHSESLNFRSKNNTMWKQSRKD
CYANSNSNNLASTCNCRHTQSSREDPYIMRQENYEFYQIIPDVCLFCVKNKKPGLLH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcctttttcgaaacatgggtatatccaaatgaccctcccaaggcatgcgaaacatta
tttcaagacgaacggaagttagttattgttggagtaataggtaaatctgcgtttcctgat
tgcaataaaatggcaggactcaatgtcttgcattcgcatccttcccatttgaattatgaa
tccaatgagggcgaaataagattctactatagcaagtcggaagatgtacttttcttacat
ttccaaacaacttacgacgaatactgcatgcgggacgcaatggttaaagaaatggaaaac
tcccagtacggtcgtcatttaaatttcaaccaatatgtgagaaatagatttgcaaaaatg
ttacttttcgcaacccaagtttgtcatatcgtggtgtttgttgaactgagtgttaccttc
gattcatcattgatatcaatttttaaatcgttgaaacttataagagaaaggcatgtcctt
aaattccttccaaaattaatgaaaagctcaagtgcatatctcggaaaaggctatcgcgtt
tgttctccaagatgtttatttttctttgaaaactatccagatggatatgataaaacagaa
gaatccatttcaaaacttgaattcgaaattgaagataatatttataagatgtttcgaaat
gagctaatcatcccgaataaaagtggaacgccactcttttcattgcctggaaataaacgg
tttgtgtattacaatacagacgataaaatacgagaagatccccttttacaaacacttcat
gaactacaatgttcttttgaaaagaatagttattttaaagacgacactaagagcaacttg
gaagaactccgtctgtttggtggtttcggaatacctcttgctcaaaatgtcgatgcggtt
attgaagaacaaccaaaaaggaataattttatgaattttttgaaagatcatattaaagaa
gccttacaatttggtttcgatgatggtgtttcaaaattcaaaagcaaaaataattttttg
gttcccactgtgaggacgtggtatgaaacttttaagctctttcataacatcttcgtagaa
aatttcgataacccaaactatgaacctgcagatccatcctacaaatttttcctggaaagt
tttgagaaactaatggacatagatgaaggatttttttcaaagtgttgcgagaatggaatt
aaaaaagcttgtaatctctataataacccagttttgagtcattatggaaagtcatttcaa
aatgcattgatcgacgaagcactatctgtgtattctgctcatgcaaggggacctaatgtg
gataaatctgaacaaaaacttgtggacaattttgaacagtgctggattgcagaaaaacat
tcggaatccctaaatttccgttcgaaaaataacacgatgtggaaacaaagtcgcaaagac
tgttatgcaaattcaaatagtaataatttagcttcaacttgcaactgtagacacacacaa
tcttctcgtgaagatccatatattatgcggcaggaaaattatgagttttaccaaataata
ccagatgtttgtctattttgtgtaaagaataaaaaacctgggctattgcattaa
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