Eupeodes corollae: 129952635
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Entry
129952635 CDS
T09463
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129952635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecoe03041
]
129952635
Enzymes [BR:
ecoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129952635
Spliceosome [BR:
ecoe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
129952635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
Cas3-like_C_2
T2SSE
nSTAND_NTPase5
AAA_30
Motif
Other DBs
NCBI-GeneID:
129952635
NCBI-ProteinID:
XP_055921348
LinkDB
All DBs
Position
3:complement(115745144..115748264)
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AA seq
892 aa
AA seq
DB search
MGRDKNRRRDSSSSSESIDSAEEERLRDIKERDAFAERLKKKDENNTRKVLESSGSRKAF
EEAAKRLKLEHEDRDKILPQLRIQSRRKYLEKRKDDKVAELEADIIDDEYLFDESVLSKR
EKEEREYKKQLLTIAKEHERARELERVQRYRMPQDMKKGEKEEYVEVDEREKLPNFEQKK
WEQEQLASAMFQFGAKDAKAKEEYELLLDDQIDFIQALTMEGTKEKKDRKPEISEAERQK
MDLQETRRSLPVYPFKDDLIAAIREHQILIIEGETGSGKTTQIPQYLIDAGFTKDKKKIG
CTQPRRVAAMSVAARVAQEMDVKLGNEVGYSIRFEDCTSERTILKYMTDGTLHREFLSEP
DLASYSCMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDADKFSQFFDDAPI
FRIPGRRFPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLQ
DRIKRLGSKLKELLVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIVYV
IDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTSWAYKHELED
NTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELT
KLGRRMAEFPLDPMMAKMLLASEKYKCSEEMVSIAAMLSVNSAIFYRPKDKIIHADTARK
NFNHMHGDHLSLLQVYNQWADTDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDM
VTCLPETINIRKAITSGYFYHVSRLSKGGHYKTIKHNQTVMIHPNSSLFEELPRWVLYHE
LVFTTKEYMRQVIEIESKWLLEVAPHYYKPKELEDSTNKKMPKTTGRALRTE
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcgataaaaaccgtagaagggactcatcttcaagttctgagagtattgacagt
gccgaagaggagcgtctacgtgatattaaggaacgagatgcatttgccgagcgtttaaaa
aagaaagatgaaaacaatacaagaaaagtcctggaatccagtggcagtcgaaaagctttc
gaagaagcagctaaacgactaaaactcgaacatgaagatcgtgataagatcctccctcaa
ttaagaattcaatcacgtcgcaaatatctggagaaacgtaaagatgacaaagtcgctgaa
ctcgaagcagatatcatcgatgatgaatatttgtttgacgaatcggtactctcgaaacgt
gaaaaagaagaaagagaatacaagaagcagttgcttaccattgccaaggagcatgagaga
gctcgagaattggagcgtgttcaacgctaccgtatgccacaggatatgaagaagggcgag
aaagaggagtatgttgaagttgacgaacgtgaaaaacttccaaattttgaacaaaagaaa
tgggaacaggagcagctagcatctgctatgttccaatttggtgccaaggatgcaaaagcc
aaagaagaatacgaactgctgctggatgatcaaatcgatttcatccaagctttgacaatg
gaaggcacgaaggagaaaaaggatagaaaacccgaaattagtgaagccgaacgacaaaaa
atggaccttcaagagacacgccggtcactcccagtgtacccattcaaagatgatcttatt
gctgctattcgtgaacaccagattttaattattgaaggtgagacaggatcaggcaaaact
acacagattcctcagtacctaatcgatgctggtttcacgaaggataaaaagaagatcggt
tgcactcagccacgtcgtgtggctgcaatgtcagttgctgctcgtgtcgctcaggaaatg
gatgttaaattgggcaacgaggtgggttatagtattcgtttcgaagattgcacatcggag
agaacgattctgaaatacatgaccgatggtacacttcacagagaatttctctcagagccc
gatttggcttcgtacagctgcatgattatcgatgaggctcatgaacgtacattgcacaca
gatattctctttggtctggtaaaagacatcgcccgctttaggcccgaattgaaactcctc
atttcaagtgcaactctagatgctgacaagttttcacagttttttgatgatgctccaatt
tttagaattcccggaagacgttttccagttgacatcttttacactaaagcccccgaggca
gactacattgatgcgtgttgtgtgtctgttcttcaaattcacgccacccagcctttgggt
gatatattggttttccttacaggtcaggatgaaatcgagacttgtcaggaagttctccag
gatcgaattaagcgtctcggctctaaactaaaagagcttcttgtgatccctgtgtatgca
aaccttcccagtgacatgcaagctaagatttttgaacctactccaccaaatgccagaaag
gtcattttagctactaacatagccgagacctccctcacaatcgacaatatcgtctacgtt
attgatccagggtttgccaaacagaataatttcaattctcgcacggggatggaatctcta
atggttgttccaatatcgaaagcttcagcaaatcaaagggcgggtcgggctggacgaact
gcaccgggcaagtgtttcaggttgtatacgtcgtgggcttataaacacgaactcgaagac
aacactgttccagagattcaaaggattaatttgggaaatgctgttttaatgctcaaagct
ctgggaatcaatgatctgatacattttgatttcctcgatccaccacctcatgaaacccta
gttttggccttggaacagttgtatgccttaggtgctctcaatcaccatggcgaactgacg
aaacttggacgtcgaatggcagaatttcccttggacccgatgatggcaaaaatgctactt
gctagcgaaaagtacaagtgttccgaggaaatggtttccattgcagctatgctatctgtg
aacagtgccattttttaccgacccaaggataaaataattcacgccgacaccgcgcgaaag
aactttaatcacatgcacggtgatcacttgagtttattgcaagtttacaaccaatgggca
gacactgattacagcacccaatggtgctatgagaacttcatacagtatcgttcgatgaag
agagcccgagatgtccgcgagcaacttgttggactgatgcagcgagttgagatcgatatg
gttacatgtctgcccgaaaccataaatatccgaaaggcaattacgtcaggttatttttat
catgtctcgcgattatcaaaaggcggtcattataagacgatcaaacataatcaaacggtt
atgattcatccgaattcatcgctgttcgaagaactgccccgatgggtgctctatcatgaa
cttgtgttcacaacgaaggagtatatgagacaagtcattgaaatcgagagcaagtggctt
ctggaagtagctcctcattactataagcccaaggaactggaggattcgacgaataagaaa
atgcccaagacaaccggtagagctttaagaactgaatag
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