KEGG   Eupeodes corollae: 129952638
Entry
129952638         CDS       T09463                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
  KO
K12857  Prp8 binding protein
Organism
ecoe  Eupeodes corollae
Pathway
ecoe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecoe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129952638
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ecoe03041]
    129952638
Spliceosome [BR:ecoe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    129952638
 Complex C
   U5 SnRNP specific factors
    129952638
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_IFT122_1st NBCH_WD40 eIF2A Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Cytochrom_D1
Other DBs
NCBI-GeneID: 129952638
NCBI-ProteinID: XP_055921351
LinkDB
Position
3:110500187..110501519
AA seq 334 aa
MGAIPKRHSSWIKRMEVHKRTHFNPSGAPALSTLLSPIVRIEDHKSEVTTCDFHPSGKFI
LSANCKGQIHICDIYGTFSKTMVLKGHTGSVTEAHFSRDGFDFYSCSSDGTIGVWDTFRG
YRKAKLDGHEDGVNCVQGGRLAYPILCSGSNDGTIRLWDVREKECVLTLENSCDVTATCF
TNNGNFAISGGLDSDIKIWDLRTCEIVCRLRGHTGKVTGLSLSPCGSYLLSYAVDNTLRI
WDIRPHVTFKRCVGCFSAHQFSPSALLRCTWSPDGTMISAGTSDRDVLVWDALTGETLHE
LPGHESTINDIKFHPKEPIILSASEDNYLFLHEF
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgggagctatacctaaaagacattcgtcatggattaaacgcatggaagttcacaaacgg
actcatttcaatccgtctggagctcctgcattgtctacacttctgtcacctatagtacgc
attgaagatcacaaaagtgaagtgacaacttgtgactttcatccttctggaaagtttatt
ttatcagctaattgtaaaggacaaattcatatatgtgatatttatggtactttttcgaaa
acaatggttttgaaaggccacacaggatcagtcaccgaagcccacttttccagagatggt
tttgatttttattcgtgttccagtgacggaaccattggagtttgggatactttccgaggt
tacagaaaagctaaattagacggacatgaggatggtgtcaattgtgttcagggtggaaga
ttagcatatcctatactttgttctggttccaatgatggaacaatccgattatgggatgtt
cgggaaaaagaatgtgtcttgacactggagaattcatgtgatgttactgcaacgtgtttt
actaataatggaaactttgcaatctctggtggacttgacagtgatatcaaaatctgggat
cttcgaacttgtgaaattgtttgtaggctacgtggtcatactggaaaagtaactggtcta
tcattatcgccctgtggttcatatttactttcgtatgctgttgataatacacttcgaatt
tgggatattcggcctcatgttacattcaagagatgtgttggatgtttttctgctcatcaa
tttagtcccagtgcacttttacgatgcacttggtcaccagatggcactatgatatcagct
ggaacgtcagatcgggatgttcttgtttgggatgctcttactggagaaacattacacgag
ttaccaggtcacgaaagcactatcaatgatattaaatttcatccaaaggaaccaatcatt
ttatcagcttcagaagacaattatttatttttgcatgagttttag

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