Eupeodes corollae: 129952668
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Entry
129952668 CDS
T09463
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03022
Basal transcription factors
ecoe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129952668
09124 Replication and repair
03420 Nucleotide excision repair
129952668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecoe03021
]
129952668
03400 DNA repair and recombination proteins [BR:
ecoe03400
]
129952668
Transcription machinery [BR:
ecoe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129952668
DNA repair and recombination proteins [BR:
ecoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129952668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
129952668
NCBI-ProteinID:
XP_055921397
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All DBs
Position
3:49225473..49228519
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AA seq
593 aa
AA seq
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MTTSSEDVLLQMGEVRFKKGDGTLYVMNERLAWMAEHRDTVAVSHRFADIKMQKISPEGK
PKVQLQVVLHDGNSSTFHFVNRNGLQAQLADRDKVKELLQQLLPNFKRKVDKELEEKNKI
LSENPNLLQLYKDLVITQVLTSEEFWATHAKEYTAKKNAKKQEIGVSGAFLADIKPQTDG
CNGLKYNLTADIIHCIFKTYPAVKRKHQENVPGKLSESEFWTKFFQSHYFHRDRITAGTK
DIFSECGKIDDQALKVAVQQGSGDPLLDLRQFEDVPLEEGFGSVSGDKHLVNSGNIVHQN
MIKRFNQHSIMVLKTCTDVTNPNSTTTTPNQTPSSAKGDTGKNDLGLNGLSEKKHKRAQA
NGDSVSSIPAVCSPEKQPKRMRIMEKISYEDLGDPVVDEVDCVVQSASKKSQQLNLAKGE
RYMHGPVPMSHQDTHDDPRELDETQYQLIRVADSWNHRSQQRCPVSATAAVNALGELSPG
GALMRGFQEQSLAQLVPPDVEKDLRHLYLSLSELLKHFWSSFPTTTPELETKAVRMHEAL
QRFKMAKLSPFENRAMRELSPLGASLTLHLNQLLQSAAAKFATFQERKMRQHR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaccactagcagtgaggatgtgttgcttcaaatgggcgaagtgcgcttcaaaaagggc
gatggcacgctttacgtaatgaacgaacgcctcgcctggatggctgaacatcgcgataca
gtggctgtgtcacatcgatttgccgatataaaaatgcaaaaaatatcacccgaaggaaag
ccaaaggtacaacttcaagttgtgctccacgatgggaacagttctacgtttcactttgtc
aatcgcaatggactgcaagctcagcttgccgaccgtgataaagttaaggaattgttgcaa
cagctcttgccaaatttcaaacgaaaagtcgacaaagaactcgaggaaaaaaataaaatt
ctatcggagaatccaaatttgctgcaactctacaaagatttggtcataacacaggtgctg
acgagtgaggagttttgggccacacacgctaaagagtatacggcaaagaaaaatgctaaa
aaacaggaaattggtgtttcgggagcatttttagccgatattaaaccacaaacagatggc
tgcaatggcctgaaatataatctcacagccgatataattcattgtatattcaaaacatat
ccagcagtcaaacgcaagcaccaagagaatgttccaggcaaactgtccgaatcggagttt
tggacaaaattctttcagtcacattatttccatcgtgatcgcatcacggcagggaccaaa
gatatttttagcgaatgtggtaaaatcgatgatcaggctttgaaagttgctgtgcaacaa
ggatccggtgatccattactagatttgcgacagttcgaggatgtgcctttggaggaaggc
ttcggtagtgtcagtggtgacaaacatcttgtaaatagtggaaacattgtccatcaaaat
atgattaaacgatttaatcagcactcaattatggttctcaaaacttgtaccgatgttaca
aatccaaatagcacaacaacaacacccaatcaaaccccgtcgtctgccaaaggagacacc
ggaaaaaacgatttgggtctgaacggtttgagcgagaaaaaacacaagagagcccaagca
aatggagattctgtcagtagcatacctgccgtatgtagtcccgagaaacaaccaaaaaga
atgcgaatcatggagaaaataagctacgaagatctcggtgatcctgtggtcgatgaagtc
gactgtgtagtgcagagtgcgagtaaaaagtcccaacaattaaatctagccaaaggcgag
cgttatatgcacggacccgttcctatgtcacaccaagatacccacgacgatccgagagag
ctcgacgaaacacaatatcaattaatacgtgtcgctgatagctggaaccacagaagccaa
cagcgatgtcctgtgagcgctacagcggctgtcaatgctttgggtgaacttagtcctgga
ggagccttaatgcgaggttttcaagagcagtcgttagcacaacttgtcccacccgatgtg
gaaaaggatcttcggcatttatatctttcactcagtgaattgctgaaacacttctggagt
tcttttccaaccacgacaccagaactggagactaaagccgtcagaatgcacgaagcattg
caacgtttcaaaatggctaagctatctccgtttgaaaatcgtgcaatgcgtgaactttcc
ccattgggagcatcactgacgttgcatttgaatcaattattacaatcggctgcagcaaag
ttcgccacatttcaagagaggaagatgcgccaacatcggtag
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