Eupeodes corollae: 129953680
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Entry
129953680 CDS
T09463
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ecoe
Eupeodes corollae
Pathway
ecoe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecoe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129953680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecoe03021
]
129953680
03019 Messenger RNA biogenesis [BR:
ecoe03019
]
129953680
Transcription machinery [BR:
ecoe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129953680
Messenger RNA biogenesis [BR:
ecoe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129953680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCHC
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
129953680
NCBI-ProteinID:
XP_055922985
LinkDB
All DBs
Position
1:158799789..158801129
Genome browser
AA seq
322 aa
AA seq
DB search
MDIIIANVTHIEFKIEKDLNGQFGALPLPFPGMDKSTAAVCQFFNCADGSMCDKGAACPF
RHVRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDP
ESKLKDCPWYDRGFCRHGPHCRHRHVRRVLCMNYLAGFCPDGSACKYMHPRFELPAPPEI
PKDQMVKRLPTCHYCGELGHKASGCPKMPPEQREMTIRQEEQRFRSLSYYKQQVQNHHHY
HHQPHHQQQQQNNPNNVSTTVPEENAAEGAIKQESPQKPIPRPLEEITCYKCGHKGHYAN
KCPKGHLAFLSNQHSHKKKDST
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggatattatcatagcgaatgtaactcacatcgagttcaaaatagaaaaagatctaaat
ggacaattcggtgcgcttccactacccttccctggaatggacaaatcaacggcggcggtt
tgtcaattctttaactgtgccgatggctccatgtgcgacaaaggtgctgcttgtcccttc
cgacatgtacgcggggacaggacggtcgtttgcaaacattggctacgtggattgtgcaaa
aagggtgatcagtgtgagtttttgcacgaatacgatatgacaaaaatgcctgaatgctac
ttctactctcgattcaatgcgtgccacaacaaagaatgtcccttcctgcacattgacccg
gaaagcaagcttaaggactgtccgtggtacgacagaggattctgtcgacacggtccccat
tgtcgccacaggcatgtgcgacgcgtgctgtgcatgaactacttggccggtttctgtccc
gatggctctgcttgtaaatacatgcatccgagatttgaacttccagcgcctcctgaaatc
cccaaagatcaaatggttaagcgcttacctacttgtcactattgcggcgaattgggtcac
aaggcgtctggttgtccgaagatgcctccggaacagagagaaatgacaatacggcaggag
gaacaacgtttccgttcactctcatactacaaacaacaagtgcaaaaccatcaccactat
caccatcaaccgcatcatcagcaacaacaacagaacaatccgaataatgtaagcacaacg
gtgccagaggaaaatgccgccgaaggtgccatcaaacaagaatccccacagaaacccata
cccaggcccctggaagagataacttgctataaatgtggtcacaagggtcattatgccaac
aaatgccccaagggtcatctcgctttcttgtcgaaccaacatagtcacaagaaaaaagac
agcacctaa
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