Paremcibacter congregatus: FIV45_00135
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Entry
FIV45_00135 CDS
T06024
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ecog
Paremcibacter congregatus
Pathway
ecog03030
DNA replication
ecog03410
Base excision repair
ecog03420
Nucleotide excision repair
ecog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIV45_00135 (polA)
03410 Base excision repair
FIV45_00135 (polA)
03420 Nucleotide excision repair
FIV45_00135 (polA)
03440 Homologous recombination
FIV45_00135 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecog03032
]
FIV45_00135 (polA)
03400 DNA repair and recombination proteins [BR:
ecog03400
]
FIV45_00135 (polA)
Enzymes [BR:
ecog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIV45_00135 (polA)
DNA replication proteins [BR:
ecog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FIV45_00135 (polA)
DNA repair and recombination proteins [BR:
ecog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FIV45_00135 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIV45_00135 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
HHH_5
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QDE25796
LinkDB
All DBs
Position
26045..28837
Genome browser
AA seq
930 aa
AA seq
DB search
MTDNTPTAIPQHLYLIDASAFIFRAYHALPPLTRHDGTPINAVMGFSNMLFKLLKDFDDN
VRPTHLACIFDRARKTFRNDIYPEYKAHRPPAPEDLVPQFPIIREVVDAFNVPAIDSDGY
EADDVIATYARQAEAKGFEVTIVSSDKDLMQLISDKINMFDGMKNKFIGAQEVFEKFGVG
PEKVIEIQALAGDSADNIPGVPGIGVKTAAQLIIEYGDLDSLLARAHEIKQPKRREKLME
NADMARTSRELVTLVTDVQGLPDIDTLKVQDIDAEQVLPFLEEQGFRSLQVKVMSHMAPD
QIPDSVQNMAEAVPAEVVYETVTTLAQLEKWVASIRAAHQVAVDTETTSLNAMAAKLVGI
SLSVTSGRACYIPLRHTTVVAGELDFGDAQAPDQIPVDKALAALKPVLEDPAILKIGQNI
KYDYLILAKEGIHIHPYDDTMMMSYVLDAGVHGHGMDELAKLHLNHDCIPFKTVCGSGKN
QITFDQVPVDKATQYAAEDADITGRLHRVLKPRLSREKMTTVYETIDRPLAAVVAGMEQH
GILVDRQMLHRLSNDFAERLAVLEKEIHGLAGREFNIASPKQLGEILFGELGLPGGKKNK
NGSYSTNVDVMEKLAGEGHDLPRRVLDWRQLAKLKSTYTDALQNEINVDSGRIHTSYSLA
ATTTGRLSSNEPNLQNIPIRTEEGRKIRQAFIPKPGHKFLAADYSQIELRLLAHIADLDS
LKQAFRDGIDIHAMTASQVFGVPLEGMDPIVRRQAKAINFGIIYGISAFGLARQLGIGNG
EAKQFIDTYFERFPGIRHYMEETKDFCRRHGYVETIFGRRCHIANINDKNGMQRSFGERA
AINAPIQGAAADIIRRAMSQMPSALQEAGLDAKMLLQVHDELVFEVPEDQIEATIPVVKR
TMEQAALPALEISVPLTVDCGTGDNWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataatacgccgacggcgataccacagcatctttacttgattgacgcatcagcg
tttatttttcgggcttatcatgccctgccgcctttgacccgccatgacggcacgccgatt
aatgccgtgatgggcttttccaacatgttgttcaagttgctgaaggatttcgacgacaat
gtgcggccgacccatctggcctgtatatttgaccgagcgcgcaagacattccgcaatgat
atctatccggaatataaagcccaccgtcccccggccccggaagatctggtgccgcagttc
ccgattatccgtgaggtggttgacgccttcaatgtaccggccatcgacagcgatggttat
gaggcggatgatgtgattgccacctatgcccgtcaggccgaagcaaaggggtttgaggtc
accatcgtatcttcggacaaggatctgatgcagctgatcagtgacaagatcaatatgttt
gacggtatgaagaataaatttatcggggcgcaagaggtgttcgagaaattcggtgtcggg
ccggaaaaggtgattgaaatacaggcgctggccggcgacagcgccgataatattccgggt
gtgccgggcatcggggtcaagaccgccgcccagctgatcatcgaatatggcgatctcgac
agcctgctggcccgcgcccatgaaatcaagcagcccaagcgacgggaaaagctgatggaa
aatgccgacatggcgcgcacaagccgggaactggtcacgcttgtcacggatgttcagggg
ttgccggacattgacacgttgaaggtgcaggatatagatgcggagcaggtattgccgttt
ctggaagaacagggttttagaagtcttcaggtcaaggtgatgtcccatatggcccccgac
caaattcctgattctgtacaaaatatggcagaggcggtgccggcagaagtcgtctatgag
accgttactacattggcacaattggaaaagtgggtcgccagtatccgggccgcgcatcag
gtggcggttgatacggagaccacatccttgaatgcgatggcggcgaagcttgtggggatt
tccctgtcagtcaccagcgggcgggcctgttatattcctttacgtcatacgacggtggtg
gcgggcgagcttgattttggcgacgctcaggcgccggaccagattcccgttgataaagcg
ctggccgccttaaaaccggttctggaagacccggcgatccttaaaatcggccagaacatc
aaatatgattatctgatcctcgccaaggaaggcattcatattcatccctatgatgatacg
atgatgatgtcttacgttctggatgccggggtacatggccatggcatggacgaattggcg
aagctgcatctgaatcacgactgcattcccttcaagacggtctgtggcagtggcaaaaac
cagatcacgtttgatcaggtgccggtcgacaaggccacccaatatgccgctgaagatgcg
gatatcaccgggcggttgcatcgggtgttgaaaccccggctgtcgagagaaaaaatgacc
acggtctatgagacaatagaccggccgttggcggcggtggtcgcgggtatggagcagcat
ggcatattggttgaccgtcagatgttgcaccggctgtccaatgattttgccgaacgcctt
gcggtgctggaaaaggagatccacggtcttgccgggcgcgaatttaatatcgcttcccca
aaacagctgggggaaattcttttcggtgagctgggtctgccggggggcaagaaaaacaag
aatggcagctacagcaccaatgtggacgtcatggagaaactggccggagaaggccatgac
ctgccgcggcgggtactggactggcggcaactggccaagctgaaaagcacctataccgat
gcgctgcagaatgaaataaatgtcgacagtggccgcattcacacatcttactccctggcg
gcaaccaccaccgggcggctgtcgtccaatgagccgaatttgcagaatattccgatccgc
accgaggagggccggaaaatccggcaggcctttatccccaagccgggacataaattcctt
gccgccgattatagccagattgaactgcgtctgctggcccatatcgccgatcttgacagc
ctgaagcaggcttttcgtgacggaatagacattcacgccatgaccgcgagccaggtgttt
ggcgtcccgcttgaggggatggacccgattgtccgccgacaggccaaggcgatcaatttc
gggattatttacggcatcagcgccttcgggctggcgcggcaactggggatcggcaacggg
gaagccaagcagttcattgacacttattttgaacgttttcccggtattcgtcactatatg
gaagagaccaaggatttctgccgccgtcatggctatgtggagaccatctttgggcgccgt
tgccatattgccaacatcaatgacaagaacggcatgcagcggtcctttggcgagcgggcg
gcgattaacgcgccgatacagggggcggcggcggacatcattcgacgggcaatgagccaa
atgccatccgcgctgcaggaagccggacttgatgccaaaatgctgctgcaggtgcatgat
gaactggtgttcgaagtgccggaagaccagattgaagcgaccattccggtggttaagcgg
acaatggagcaggcagcgttgccggcgcttgaaatcagtgtccctcttacggtcgattgt
ggcaccggcgacaactgggacgaggcgcattga
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