Paremcibacter congregatus: FIV45_00990
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Entry
FIV45_00990 CDS
T06024
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ecog
Paremcibacter congregatus
Brite
KEGG Orthology (KO) [BR:
ecog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecog03400
]
FIV45_00990 (addA)
Enzymes [BR:
ecog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIV45_00990 (addA)
DNA repair and recombination proteins [BR:
ecog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FIV45_00990 (addA)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
SLFN-g3_helicase
AAA_25
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QDE25955
LinkDB
All DBs
Position
215124..218528
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AA seq
1134 aa
AA seq
DB search
MTAQTPDQKRASDPTASVWVAASAGTGKTFVLTNRVLRILLNGTRPERILCLTFTKAAAA
EMANRLNKRLGQWVTCSDADLRRDITDLTGHAPRPDEQDQARKLFAQVLEVPGGLKIQTI
HAFCQSLLGRFPLEAGIAPHFQVMDERTALDHLARARDAVLTEAQAAINPALAEALAYIS
RKVTETTFGELIRELIGQRSGLEQMLGRVRLVAQAISAMENLLGLSRGDTRESLIAAACE
EENFSGAGLRQAVETLLGGSAANQKTAALMAGWLGAPDDRRERFEGYKSAYLTTKGEIRK
SLMPKKLAESCPGGLAAMEAEADRLQALDGKLKLVTLLDNSRALLSLGAAMMTAFRDSKK
RHAVMDYDDLILKVTDLISREGIADWILYKLDGGIDHILIDEAQDTNPEQWRVVKALAEE
FFTGEGQGEAVRTLFAVGDVKQSIYSFQRADPKEFVDNRLTFEEKSAAVDHSFHNVNLAL
SFRSTAAVLSLVDQVFIAADSRIALSFSPDEIRHLPSRVGHAGLVEVWDTSAPDVLPDPD
DWQPPVIQQPSHAPEMKVALRIADRIKLWLDTGEILEAQGRPIRAGDIMILVRRRTAFDD
YMIRALKARDIPVAGQDKMLLSEQIAVMDLMAVGQLVLLPDDDLTLAVVLKSPLVGFSEE
DLYDLAYGRRGSLWAALLTRKDERDSFRRAHEFLTNLTNFADQAPPFEFYSHLLTSLRGR
EKLLARLGEEANDPIDEFLQLAMGYEANNISSLQGFLSWVEQGNVEIKRDMEQGQDQVRI
MTVHGAKGLQAPIVFLPDTCQVPSKGSRLLWADGLLFWPQKSDYELGPCAEARAAINLNR
DQEYLRLLYVALTRAEDRLYITGWDGKRERSENCWYDRIKAALSDMDGVRAGDDSDDYLL
RYHCPQEAVLPGEEARTTEMRATQPLPPWAKSLPPAEPSPVRPLSPSRPEEEEPAVQSPL
LASAVKARDQSRFHRGRLIHRLLEILPDMAVVRQAQAAEEFLSQPAYDLAAEDIAGITKQ
IMGILSDPAFAAVFGPGSRAEVPIVGLVGATPVSGQVDRLVVTEDSILVVDYKTNRPPPF
DVADVSRLYLRQMAAYRAVLRDIYPDKEITCMLLWTDVADLMALPNPLLDQVIF
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccagacccctgatcagaaacgtgcttccgatcccaccgcctccgtctgggtg
gcggcgtctgcgggcacgggcaagactttcgtgctgaccaaccgggtgctgcgcattctg
ttgaacggcacacgcccggaacgcattctctgcctgactttcaccaaggcggcggcggcg
gagatggccaaccggctcaacaaacggctcggtcaatgggtgacctgttcggacgcggac
ctgcggcgggatatcaccgacctgaccggccacgccccgcgccccgacgaacaggatcag
gcccggaagcttttcgcccaggtgctggaagtgccgggcgggttgaaaattcagaccatt
cacgccttctgtcagtcgctgctcgggcgcttccctctggaagccggaattgccccccac
tttcaggtgatggatgaacgcaccgccctggatcatctggcccgcgcccgtgatgcggtc
ctgaccgaggcgcaggcggcaatcaatccggcgctggcggaggcgctggcctatatttcc
cgaaaagtaacggaaacgacctttggtgagttgatccgcgagctgatagggcaacgcagc
gggctggaacagatgctgggccgcgtccggctggtggcgcaagcgatatccgccatggag
aatttgttgggcctgtcccgcggcgacacgcgggagtcgcttattgcggccgcctgcgag
gaagaaaatttttccggtgcgggcttgcggcaggcggtggagaccctgctcggcggtagc
gcggccaatcagaaaaccgcggcgctgatggcgggctggctcggcgcacccgacgaccgc
cgagagagatttgaggggtacaaaagcgcgtatctcaccaccaagggcgagattcgcaag
agcctgatgccgaaaaagctggcggaaagctgcccgggcggcctggcggcgatggaggcg
gaggcggaccgtctgcaggcgcttgatgggaagcttaaattggtcaccctgctggacaac
agccgggcgttgctcagtctcggggcggcgatgatgacggcgtttcgcgacagcaaaaaa
cgccatgcggtgatggattatgacgatctgatcctcaaggtgaccgatctgatcagccgc
gagggcattgccgactggattctctataagctcgacggcggcatcgaccatatcctgatc
gacgaagcccaggacaccaacccggaacaatggcgggtggtcaaggcgctggccgaggag
tttttcaccggcgagggccagggagaggcggtgcgcaccctgttcgccgtcggtgacgtc
aagcagtcgatctatagttttcagcgcgccgatccgaaggaattcgtcgataaccgcctg
acgttcgaagaaaaatcggcggcggtggaccacagcttccacaatgtcaatctcgccctg
tccttccgctcgacggcggcggtgctgtcgctggtcgatcaggtgtttattgccgccgac
agccgcatcgccctgtcctttagcccggatgagatccgtcatctgccgtcgcgggtcggc
catgcggggctggtggaagtgtgggatacttcagcgccggatgtgttgcccgacccggac
gactggcagccgccggtgatccagcaaccgtcccatgcaccggaaatgaaagtggcgctg
cgcattgccgaccgcattaaattgtggctcgacacgggggagattctggaagcccagggt
cgtccgatccgggccggggacatcatgattctggtgcgccgtcgcaccgcctttgacgat
tatatgatccgggccctgaaggcgcgcgatatcccggtggcggggcaggacaagatgctg
ctgagtgagcagatcgcggtgatggacctgatggcggtggggcagttggtgctgctgccc
gatgatgatctgacgctggcggtggtgttgaaaagcccgctggtcggtttttcggaagag
gatctttatgatctggcgtatggccgtcgcggcagcctgtgggcggccctgctcacccgc
aaggacgagcgggacagcttccgccgcgcccatgagttcctgaccaacctgaccaatttc
gccgatcaggccccgccgtttgaattttacagtcatctgctgaccagcctgcgcgggcgc
gagaagcttctggcgcggctcggcgaagaggccaacgatccgattgatgaattccttcag
ctcgccatgggctatgaggccaataatatctcctccctacagggatttttgagctgggtc
gagcagggcaatgtggagatcaaacgcgatatggagcagggccaggatcaggtgcgcatc
atgaccgtgcacggggccaagggcctgcaggcgccgatcgtcttcctgcccgatacatgt
caggtgccgagcaaggggtcgcgcctcttgtgggcggacggtctgttgttctggccccag
aaaagcgactatgaacttggcccctgcgccgaagcgcgggcggcgatcaacctcaaccgg
gatcaggaatacctccggctgctttatgtggccctgacccgggcggaagaccggctctat
atcaccggctgggacggcaagcgcgagcgcagtgaaaactgctggtatgaccgcatcaag
gcggccttgtccgacatggacggggtgcgtgccggcgacgacagtgatgattacctgctg
cgctatcattgccctcaggaggcggtgctgccgggtgaagaagcccggacgaccgagatg
cgggcgacacagcccttgcccccttgggcgaaatccctgccgccggcggagccttccccg
gtgcggcccttaagcccgtcgcggcccgaggaggaagaaccggcggtgcaaagcccgttg
ctggccagcgccgtgaaagcgagggatcagagccgcttccatcgcgggcgactgatccac
agactgttggaaattctgccggatatggcggtggtgcgacaggcacaggcagcggaagag
tttctctcgcaaccggcctatgatttggcggcggaggatatcgcgggaatcaccaagcag
atcatgggcattctcagcgatccggcctttgccgcggtctttggtcccggcagccgcgcc
gaggtgccgattgtcgggctggtgggggcgaccccggtgtcgggtcaggtggaccggctg
gtggtgacggaggacagcattctggtggtcgattataaaaccaatcgtccgccgcccttt
gacgtggctgatgtctcacggctctatctgcgccagatggcggcctaccgggcggtgctg
cgggatatatatccggacaaagagatcacttgtatgctgctatggaccgatgtggctgat
ctgatggcattgccgaatcccttgctggatcaggtaattttttga
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