Paremcibacter congregatus: FIV45_01040
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Entry
FIV45_01040 CDS
T06024
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ecog
Paremcibacter congregatus
Brite
KEGG Orthology (KO) [BR:
ecog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecog03032
]
FIV45_01040
03036 Chromosome and associated proteins [BR:
ecog03036
]
FIV45_01040
03400 DNA repair and recombination proteins [BR:
ecog03400
]
FIV45_01040
DNA replication proteins [BR:
ecog03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FIV45_01040
Chromosome and associated proteins [BR:
ecog03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FIV45_01040
DNA repair and recombination proteins [BR:
ecog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FIV45_01040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HD_assoc_2
HU-DNA_bdg
HU-CCDC81_bac_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QDE25965
LinkDB
All DBs
Position
complement(226663..226944)
Genome browser
AA seq
93 aa
AA seq
DB search
MIKSELIARLVEANPHLYQRDVERIVNTIFEEITTALADGNRVELRGFGAFSVKHRPSRV
GRNPRTGETVNVPEKHVPYFKTGKDLRERLNGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgataaagtcggagctgattgcacgtttggtagaagccaaccctcatctttatcagcgt
gacgtggaacggatcgtcaacaccatcttcgaagaaatcacaaccgcgcttgccgatggc
aaccgggtggagcttcgcgggtttggcgctttttctgtcaagcatcgtccaagccgcgta
ggccgcaacccgcgcaccggggaaaccgttaatgtgccggaaaaacatgtgccctatttc
aaaaccggcaaggatctgcgggaacggctgaacggtaaataa
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