Paremcibacter congregatus: FIV45_01350
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Entry
FIV45_01350 CDS
T06024
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ecog
Paremcibacter congregatus
Brite
KEGG Orthology (KO) [BR:
ecog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecog03009
]
FIV45_01350
Enzymes [BR:
ecog01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
FIV45_01350
Ribosome biogenesis [BR:
ecog03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FIV45_01350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QDE26023
LinkDB
All DBs
Position
complement(285337..286371)
Genome browser
AA seq
344 aa
AA seq
DB search
MTDETQKPATAGTEPQDAPAKGERIAKMLARAGVGSRRAVERMIEAGMVKQGDRVIDTPA
TLITSVEGITVDGQKVNPPEPTKIWLYHKPAGRVTTYFDPDGRPTVFEALPANMPRVLSV
GRLDLNTEGLLLLTNDGELSRWLELPSTGWLRTYKVRCHGYFDRDRLAEIRRGLTIDDVK
YRGVKIDINESREKSNLWLTIAIREGKNREVRKLLEYIGLQVTRLIRLSYGPFELKEMAR
GTILEVPTKDTHLHCAEYFKDKGIEAPGGVTAEKPSSRPAKERQGWAKAKPKTNNRRANK
KRTDPKRFEEDLPKKVRGNRPSTPPRGKSPATARAKTPRPSGKK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgaaacgcaaaagcccgctacggccggcacagaacctcaggatgctcccgcc
aaaggcgaacgcatcgcaaaaatgctcgcccgggccggtgtcggctcacgccgggccgtg
gaacggatgattgaagccggcatggtcaagcagggcgaccgggtaattgatacccccgcc
accctgatcaccagcgtcgagggaatcaccgtcgatggccagaaagtcaatccgccggaa
cccaccaaaatctggctgtaccacaagccggccggtcgggtgaccacctatttcgacccc
gatggccgcccgactgtatttgaagccctgccggccaatatgccgcgggtcctgtccgtc
ggccgccttgatctgaatacggaaggcctgctgctgctgaccaatgacggggaattgtcc
cgttggctggaactgccgtccacaggctggttgcggacctacaaggtgcgctgtcacggt
tatttcgatcgcgaccggctggcggaaatccgccggggcctgaccatcgacgatgtcaaa
tatcgcggcgtcaagatcgacattaatgaaagccgggaaaaatccaatctgtggctgacc
atcgccattcgcgaaggcaaaaaccgggaagtgcgcaagctgctcgaatatatcggcttg
caggtgacgcgcctgatccggctgtcatacggcccgtttgaactgaaagaaatggcccgg
ggcacaattctggaggtgccgaccaaggacacccacctgcattgcgccgaatacttcaag
gacaaaggcatcgaagctcccggcggcgttacagccgaaaaacccagttcgcggccagcc
aaagaacgccagggctgggccaaggcgaaacccaaaaccaataaccggcgcgccaacaaa
aaacgtacagacccgaaacgtttcgaagaagatctgccgaaaaaggtccggggcaaccgg
ccttcgacacccccgcgcggcaagtcccccgccaccgcccgcgctaaaacaccgcggccc
tcggggaaaaaatga
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