Paremcibacter congregatus: FIV45_01545
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Entry
FIV45_01545 CDS
T06024
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ecog
Paremcibacter congregatus
Pathway
ecog03420
Nucleotide excision repair
ecog03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FIV45_01545
03430 Mismatch repair
FIV45_01545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecog03400
]
FIV45_01545
Enzymes [BR:
ecog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIV45_01545
DNA repair and recombination proteins [BR:
ecog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIV45_01545
MMR (mismatch excision repair)
Other MMR factors
FIV45_01545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QDE26059
LinkDB
All DBs
Position
complement(329248..331572)
Genome browser
AA seq
774 aa
AA seq
DB search
MSDPFDLDNFAAEDIPFDAAPAETAAPLTPPYMEGLNPPQREAVETIDGPLLVLAGAGTG
KTRVLTTRLAHILAMNKCFPGQILAVTFTNKAAAEMKDRVGRIIGSAVESMYWLGTFHAI
GVKILRQHGHLVGLESNYTILDSDDQLRLIKQIVRSHDIDEKRWNPKLLASLIDGWKNRG
LMPSQVPDQEGQDYADGQGKLLYAEYQNRLRTLNAADFGDLILLCLTLLQNNPDVRADYQ
RRFRYILVDEYQDTNVAQYLLLRLLAQGHQNICCVGDDDQSIYGWRGAEVGNILRFEKDF
DGAQVVRLEQNYRSTVHILGASGGLIEANQSRLGKTLWTETEGGDKITVNPVWDGREEAR
VIGEMVEDRQRQKQPLSEMAILVRAGFQTREFEERFLTLGVPHRIVGGFRFYERAEIRDV
LAYLRHIANPNDSLALERIINVPKRGIGDATVNKLHAISRSQNCTLAEAGRRIIDTDELR
GKAKNSLTRLLDDIDRWRDQAKDNDHIALAETVMEESGYSEMWRLDKSPDAQGKLENLGE
LIRAMEPFTDLAEFLEHIALVMENAHNDQQDKINIMTLHGAKGLEFDTVFLPGWEEELFP
SKKSLEEQGPKGLEEERRLAYVGLTRARKEAHIFHVASRYLYGNYTSPLPSRFISELPAD
HVEIQQSQGMYGQATPGGFSESFSGGGATQKWSQGYDPGQSGSYQLDRSRSKSPRAGARP
ASKTAAPSAFKVGDRVFHDKFGYGIVILLDGNKLEVDFEMSSSRKVMDSFVKPA
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacccatttgatcttgataatttcgcggccgaagatattcccttcgacgccgcg
cccgcagaaaccgcagcgcccctgaccccgccctatatggaggggctcaacccgccgcaa
cgcgaagccgttgaaaccatcgacgggccgttgctggtgcttgccggcgccggaacgggc
aagacccgggtgctgaccacccgtctcgcccatatcctggccatgaacaaatgtttcccg
gggcagatccttgcggtgacctttaccaacaaggccgccgccgagatgaaagaccgggtc
ggacgcatcatcggcagtgcggtcgaaagcatgtattggctcggcaccttccatgccatc
ggggtcaaaatcctgcgccagcatggtcaccttgtcgggctggaaagcaattacaccatt
cttgacagcgacgaccagctgcggctgatcaaacagatcgtgcgcagtcatgacattgat
gaaaaacgctggaacccgaaactgctcgccagcctgatcgacggctggaaaaaccgcggc
ctgatgccgtcccaggtgcctgatcaggaaggccaggattatgccgacggccaaggcaaa
ttgctttatgccgaatatcaaaaccggctgcgcaccctcaacgccgccgatttcggtgac
ctgatcctgctgtgtctgaccctgctgcagaataaccctgatgtgcgggccgactatcag
cggcgcttccgctatattctggtcgacgaatatcaggataccaatgtggcgcaatatctg
ttgctgcgtctgctcgctcagggccatcagaatatctgttgcgtcggcgatgacgaccag
tcgatttacggctggcgcggcgcagaggtcggcaatatcctgcgttttgagaaagatttc
gacggggcgcaggtggtgcggcttgagcagaattaccgctcgaccgttcatatcctcggc
gcgtccggcggtctgatcgaagccaatcagagccggctcggcaagaccctgtggaccgaa
accgaaggcggtgataaaatcaccgtcaatccggtctgggacggtcgtgaggaagcccgg
gtgatcggcgagatggtcgaagaccggcaacgccagaaacagcctctcagcgaaatggcc
atcctggtgcgggccgggttccagacccgggaatttgaggaacgcttcctcaccctgggt
gtgccgcatcgcattgtcggcggctttcgcttttatgaacgcgccgaaatccgcgatgtg
ctcgcttatctgcgtcatatcgccaaccccaacgacagcctggcgctggaacggatcatc
aatgtgcccaaacgcggcattggtgacgccaccgtcaacaagctgcacgccatttcccgc
agccagaattgcaccctggccgaggcgggccgtcgcatcatcgacaccgacgaattacgc
ggcaaggccaaaaacagcctcacccggctgctcgacgatatcgaccgctggcgcgatcag
gccaaagacaatgatcatatcgcgctcgccgaaacggtgatggaggaaagcggctattca
gaaatgtggcggctcgacaaatcccccgacgcccagggcaagctggaaaatctcggcgag
ctgatccgcgccatggagcctttcacggatctggccgaattccttgagcatatcgcgctg
gtgatggagaatgcccacaatgatcagcaggacaagatcaacatcatgaccctgcacggc
gccaagggactggaatttgacaccgtcttcctgcccggctgggaggaagagctgttcccc
agcaagaaatccctggaagaacagggccccaaggggctggaggaagaacgccgtctcgcc
tatgtcggcctgacccgcgcccgcaaggaagcccatattttccatgtagcctcacgctat
ctttatggcaattacaccagccccctgccgtcacgctttatcagtgaactgccggcggat
catgtggagatccagcagtcccaaggcatgtatggtcaggcgacgccaggaggtttctcg
gaaagtttctccgggggcggggccacgcaaaaatggtcacaaggctatgaccccggacag
tcagggtcctatcaactcgaccgcagccggtccaaaagcccccgcgccggggccaggccc
gcctccaaaacagccgccccttccgcctttaaagtcggcgaccgggtgtttcatgataaa
ttcggttatggcatcgtgatcctgcttgatggcaacaagctggaagttgattttgaaatg
agcagcagccgcaaggttatggacagcttcgtcaaacccgcataa
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