Paremcibacter congregatus: FIV45_03070
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Entry
FIV45_03070 CDS
T06024
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ecog
Paremcibacter congregatus
Pathway
ecog03030
DNA replication
ecog03430
Mismatch repair
ecog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIV45_03070
03430 Mismatch repair
FIV45_03070
03440 Homologous recombination
FIV45_03070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecog03032
]
FIV45_03070
03400 DNA repair and recombination proteins [BR:
ecog03400
]
FIV45_03070
Enzymes [BR:
ecog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIV45_03070
DNA replication proteins [BR:
ecog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIV45_03070
DNA repair and recombination proteins [BR:
ecog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIV45_03070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QDE26331
LinkDB
All DBs
Position
670395..671342
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AA seq
315 aa
AA seq
DB search
MQEPVLNFYDDAGFEQAIDQLGLSGGHRILRKITFPHPSQVNILKHSGMADYAIHRGIYL
DTETTGLSHAEDEVIQLCLLPFLYAVDATTNYALIIGVYPPYVGFQEPTRLLTQEIIDLT
GITMAMLVGQTLDVPKIESLLDKTDLVIAHNAAFDRPFTHGISGKFSEKKWACSMSNIPW
KDQGFESLKLIHLAADLGFYFEPHQADKDCLAGLAILAQVGDAGESYFQQLIRAAAEDSV
TLRAQFAPFELKDVLKQRGYLWKDGSDGIAKGWETVVPLSDADGERAWLSETIYHGAEKW
YERREDALTRFTRAS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagaaccagttttgaatttttatgatgatgccggatttgagcaggcgattgatcag
ttgggactgtctggtggccacagaatattgcgtaaaattacatttccccatccttctcaa
gtgaatattctcaaacacagtggcatggcagactacgcgatccataggggaatttatctc
gatacggaaaccaccggactttcccatgccgaggatgaggttattcagctttgcctgttg
cccttcctctacgccgtggatgcgacgacaaactatgcgctgatcatcggggtatatcct
ccctatgttggctttcaggaaccgaccaggctattgacccaggagatcattgatctcacg
ggaatcacgatggccatgctggtggggcaaactctggatgtgccgaagatcgaaagtctt
ttggacaagaccgatctggtcattgcccataacgcggcatttgatcgacccttcacccat
ggcatcagcgggaaattttccgaaaagaaatgggcctgctccatgagcaatatcccgtgg
aaggatcagggatttgaaagtttgaaactgatccatttggcggcagatcttggtttttat
tttgaaccacatcaggcggataaggattgtctggcgggtcttgccattctggcgcaggtg
ggggatgccggggaaagctactttcagcagctgatccgggcggcggcagaggacagcgtt
acgctccgcgcacaattcgcaccttttgaactgaaagatgtgctgaagcagcgcggctat
ctttggaaggatggcagtgacggtatcgcaaaaggctgggagacggtggtccctctctcc
gatgccgatggcgaaagagcctggttgtcagaaaccatctatcatggcgcagagaaatgg
tatgagagaagagaagacgcgctgaccagatttacgagggcctcctaa
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