Paremcibacter congregatus: FIV45_05210
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Entry
FIV45_05210 CDS
T06024
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ecog
Paremcibacter congregatus
Pathway
ecog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FIV45_05210 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecog03400
]
FIV45_05210 (ruvB)
Enzymes [BR:
ecog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIV45_05210 (ruvB)
DNA repair and recombination proteins [BR:
ecog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FIV45_05210 (ruvB)
RecFOR pathway proteins
FIV45_05210 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_16
RNA_helicase
AAA_14
nSTAND3
AAA_22
AAA_18
AAA_2
DUF815
TsaE
Rad17
AAA_28
AAA_17
NTPase_1
AAA_24
NB-ARC
Bac_DnaA
HTH_39
AAA_33
Parvo_NS1
NACHT
AAA_25
Sigma54_activ_2
IstB_IS21
AAA_7
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QDE26711
LinkDB
All DBs
Position
1174428..1175492
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AA seq
354 aa
AA seq
DB search
MSEHDQDRLLDSGVKSEDDGDSSIRPTRLDDFIGQRKSCDNLKIFIEAARQRGSALDHVL
FYGPPGLGKTTLAQIMARELGVNFRATAGPVISKAGDLAALLTNLEENDILFIDEIHRLN
PAVEEILYPAMEDYHLDLIIGEGPAARSVRIDLPPFTLIGATTRSGLLTTPLRDRFGIPT
RLEFYSAEDLETIVRRAARVLKVEMTKDGAMEVARRARGTPRIAGRLLRRVADYALVRAN
GAIDKRVADLALNMLEVDSLGLDRMDHKYLTCIGVNYNGGPVGIETLAAALSEPRDAIEE
IIEPYLIQTGLVQRTPRGRMLAPQGFDHIGIAMPNDPVRNGSAARPDQMNLLEK
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacatgatcaggaccggttgctggacagtggtgtcaagagtgaggatgatgga
gattcctcaatccgtcccacgcgtcttgatgattttatcggccagcgcaaaagctgcgac
aatctgaagatttttatcgaggcggcgcggcagcgcggcagtgcgctggatcacgtgctg
ttctatggcccgccggggcttggcaagaccactctggcgcagattatggcgcgggagctg
ggcgtgaattttcgcgccacggccgggccggtgatttccaaggccggggacctggcggcg
ctcctgaccaatctcgaagaaaatgatattctgttcattgatgaaattcaccggctcaat
ccggcggtggaggaaattctctatccggcgatggaagattatcatctggatctgatcatc
ggggaggggccggcggcccgttcggtgcggattgatttgccgccctttaccctgatcggc
gccacgacccggtcgggccttctgacaacgccgttgcgcgaccggtttggcattccgacc
cggctcgagttttattcggccgaggatctggaaaccatcgtcaggcgggcggcccgggtg
ttgaaagtcgagatgaccaaggatggggctatggaagtggcgcgacgggcgcgaggcacg
ccgcgtattgccggacgtctgttgcggcgggtggcggactatgcgctggtgcgcgccaac
ggggcaatcgacaagagggtcgccgatctggcgctgaatatgctggaagtcgacagcctc
ggtcttgaccggatggatcataaatatctcacctgcatcggggtgaattacaacggcggg
ccggtgggaattgaaaccctggccgcggccttgtcagaaccacgtgacgcgatcgaagaa
atcatcgagccttatctgatccagaccggtctggtgcagcgcaccccgcggggccggatg
ctggcgccgcaggggtttgatcatatcgggatcgccatgccgaatgatccggtcagaaat
ggcagtgcggcacgcccggaccaaatgaatttattggaaaagtaa
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