Paremcibacter congregatus: FIV45_09565
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Entry
FIV45_09565 CDS
T06024
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ecog
Paremcibacter congregatus
Brite
KEGG Orthology (KO) [BR:
ecog00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FIV45_09565 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecog03019
]
FIV45_09565 (rnc)
03009 Ribosome biogenesis [BR:
ecog03009
]
FIV45_09565 (rnc)
03036 Chromosome and associated proteins [BR:
ecog03036
]
FIV45_09565 (rnc)
Enzymes [BR:
ecog01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
FIV45_09565 (rnc)
Messenger RNA biogenesis [BR:
ecog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FIV45_09565 (rnc)
Ribosome biogenesis [BR:
ecog03009
]
Eukaryotic type
90S particles
RNase
FIV45_09565 (rnc)
Prokaryotic type
rRNA processing factors
FIV45_09565 (rnc)
Chromosome and associated proteins [BR:
ecog03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
FIV45_09565 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QDE27507
LinkDB
All DBs
Position
complement(2113818..2114510)
Genome browser
AA seq
230 aa
AA seq
DB search
MSSHQKPRKTGQYGRLYDILEYEFTNDALLREALTHPSLEGGKHYQRLEFVGDRVLGLVI
AEWLHDYYPSLDEGGLASRHTNMVRKEALAEVARDMKLPDFIHMAKSAEDNGGLKKSSIL
ADVCEAVIGAVNQDGGYLNAQKLVRKFWTRYIDQDAIAQRDAKTRLQEWVQGRQMQTPKY
VMTDRTGPAHAPFFTIEVRVKDWEPEVGKGTSKREAEQDAAAKLLRRLES
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcaccagaagcctcgcaagaccggccaatacggacggctatatgacatcctg
gagtatgaattcacgaatgatgcgttactgcgtgaggcactgacccacccaagcctggaa
ggcggcaagcattaccagcgactggaatttgttggtgatcgggttctgggattggtgatt
gccgagtggctgcatgattattatccgtcccttgatgagggggggctggccagtcgtcat
accaacatggtgcgaaaagaagcgctggccgaagtcgcgcgcgatatgaaattgcccgat
ttcattcatatggcgaaaagcgccgaagataatggtgggttgaaaaaatcctctattttg
gcagacgtctgtgaggcggtgatcggggccgtgaatcaggatggcggttatcttaacgcg
caaaagcttgtccggaaattctggacacgttatattgatcaggacgccatcgcccagaga
gacgccaagacccggcttcaggaatgggtgcagggacgtcagatgcagacgcctaaatat
gtaatgactgaccgaaccggtcccgcccatgcgcccttctttaccatcgaagtcagggta
aaggactgggagccggaagtcggcaagggcacatcgaaacgcgaagcagagcaggatgca
gctgctaaattattacgccggctggaaagctga
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