Paremcibacter congregatus: FIV45_10825
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Entry
FIV45_10825 CDS
T06024
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ecog
Paremcibacter congregatus
Pathway
ecog03030
DNA replication
ecog03430
Mismatch repair
ecog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIV45_10825 (dnaE)
03430 Mismatch repair
FIV45_10825 (dnaE)
03440 Homologous recombination
FIV45_10825 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecog03032
]
FIV45_10825 (dnaE)
03400 DNA repair and recombination proteins [BR:
ecog03400
]
FIV45_10825 (dnaE)
Enzymes [BR:
ecog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIV45_10825 (dnaE)
DNA replication proteins [BR:
ecog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIV45_10825 (dnaE)
DNA repair and recombination proteins [BR:
ecog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIV45_10825 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QDE27734
LinkDB
All DBs
Position
complement(2388648..2392193)
Genome browser
AA seq
1181 aa
AA seq
DB search
MTASSFVHLRLHSAYSLSEGAVHVKALGKLCAAHNMPAVAVTDTNNMFGALEASLTLPGA
GVQPIIGCSLAIRHAVEQDSRSFKTPEPGWLVLLAQTERGYQNLMKLVSKAHLGGDGHET
PQLNIDDLGGYTDDIICLTGGPEGPMGKYLITGTPQGREKAEAVMHKLKSLFPDRLYMEI
QRHGMTPEEATEEDFLELAYTHDIPLVATNQVFFPERKMHQAHDALLCIAGGNYVEQDDR
RKLTPEHYFKSAEEMADLFEDLPEAVQNTLVIARRCAFKVPTIDPILPNFTDGMDKTAAD
YEDISEAEALEKMARDGLDQRLEQHVFHEETDPEKRDEIAKPYWDRLEFEIGIINQMGFP
GYFLIVADFIQWSKHNNIPVGPGRGSGAGSVVAWALMITDLDPLRFGLLFERFLNPERVS
MPDFDIDFCQDKRDRVIRYVQEKYGHDQVAQIITFGKLQAKAVVRDVGRVLQMSYGQVDR
LSKLIPANPANPMTLGEALESEEKLRFERDNDPATARLIEMALQLEGLFRHASTHAAGVV
IGDRPLDELVPLYRDPRSDMPVTQFNMKFVEQAGLVKFDFLGLKTLTVLAKAVEHIALRD
ITVNLEQVPLVDQPSFDLLSSGKTIGVFQLESSGMQNVLVQMKPDMFEDIIAVVALYRPG
PMDNIPLYVACKHGEKDPDYLHPLLTEILTETYGVIIYQEQVMQIAQVLADYSLGEADLL
RRAMGKKIAAEMDKQRARFQDGAAKKGVDPKQAAGIFDQVAKFAGYGFNKSHAAAYALVS
FHTAYLKANYPVEFMAAIMSLDLNNTDKLAIFKQEVVSLGIPILPPDINKSLVEFSVEVV
PGKADEDNVGGAQGDGILRGVRYGLAALKNVGSGAMEQLIKERDKNGPFKDVADFCNRLD
TKHVNKRALENLAKAGAFDSINPNRAQMLASVEMILKQASAATEARNSNQVSLFGDVVEP
QALALPEARDWELIVRLNHEKDAIGFYLSAHPLDAYKVILERQKILPSTELERKAKGGGT
VKLAGTVQTIRVMKNKRGKKFAFIGFSDAFGGWETMVFSELLDSADEILQMGSSVIATVE
ASIDPERGLRVTAKSFAAIEVVAANSAKGLEIFLTDASNITAIREILDNHKGGRGFVTFK
IKVKDEDEYDIDIELKDKYKVSPDIRSALITMKGVMDAREI
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgacggcttcttcttttgttcatttgcgattgcattcggcctattccctgtccgagggg
gccgtgcatgtgaaagcgctgggcaaactctgcgccgcccataatatgccagcagtcgcg
gtgaccgacaccaataacatgttcggcgcgctggaagcctcgttaaccttgcccggggcc
ggggtgcaaccgatcattggttgttctctggccattcgccacgcggtcgaacaggacagc
cgcagtttcaaaacgccggaacccggctggctggtgctgcttgcccagaccgaacgcggc
tatcaaaatctgatgaagctggtctcgaaggcccatctcggcggcgatggccacgaaacc
ccgcagttgaatattgatgacctcggcggctacacggacgatatcatctgtcttacgggt
gggccggaagggccgatgggcaaatatctgatcaccggcactccccagggccgcgagaag
gccgaagcggtgatgcacaagctgaaaagcctgtttccagatcgcctctacatggaaatt
cagcgccacggcatgacgccggaagaagcaacagaggaagattttctcgaactcgcctac
acacatgatatcccgctggtggcgaccaatcaggtgttctttccggaacgtaagatgcat
caggcccatgacgctctgctctgtatcgcgggcggcaattatgtcgagcaggatgaccgc
cggaaactgacccctgaacattattttaaatccgccgaggaaatggcggacctgttcgaa
gacctgccggaggcggttcagaatacgctggtgattgcccggcgctgcgccttcaaggta
ccgacgattgatccgatcctgccgaattttaccgatggtatggacaagacggcggcggat
tatgaggatatcagtgaggcggaagcgctggaaaagatggcccgtgacggtctggatcag
cgccttgagcaacatgtctttcatgaagaaacggacccggaaaagcgcgacgagatcgcc
aagccctattgggatcgtctggaatttgagattggcattattaatcagatgggctttccc
ggctactttctgattgtggcggactttattcagtggtcgaagcataacaatattccggtg
gggccgggcagggggtccggtgcgggctccgtggtggcctgggccctgatgataaccgat
cttgatcctttgcggttcgggctgctgttcgaacggtttctcaatccggagcgggtgtcc
atgcccgatttcgatatcgatttctgtcaggacaaacgcgaccgggtgatccgttatgtg
caggagaaatacggccatgaccaggtggcgcagatcatcactttcgggaagctgcaggcc
aaggccgtggttcgcgacgtgggacgggtgctgcagatgtcttatggccaggttgaccga
ctgtcaaaactgatcccggccaaccccgctaatcccatgaccttgggcgaggcgctggaa
tcggaagaaaagctgcggtttgaacgcgacaatgacccggcgacggcgcgcctgattgaa
atggccttgcagcttgagggtctgttccgtcacgcctctacccatgccgccggggtggtg
attggtgaccggccactggatgagctggtgccgctctatcgtgatccgcggtccgatatg
ccggtgacccagttcaacatgaaatttgtcgagcaggccggactggtaaaattcgacttt
cttggcctgaagaccctgacggtgctggccaaggccgtggaacatatcgccctgcgcgac
atcacggtcaatctggaacaggtgccgctggtggatcaaccgagcttcgacctgttgtcc
agcggcaagaccatcggcgtcttccagttggaaagtagcggcatgcagaatgtgcttgtg
cagatgaagcccgacatgttcgaggatatcattgcggtcgtggcgctctatcgaccgggg
ccgatggacaatattccgctctatgtcgcctgtaagcatggggagaaagacccggactat
ctgcatcctctgctcaccgaaatcctcaccgagacttatggcgtgatcatctatcaggaa
caggtgatgcagatcgcccaggtgctggcggactattccctcggcgaagcggatttgctg
cgccgggccatgggcaagaagatcgcggccgagatggacaagcagcgcgcccgctttcag
gatggggccgccaagaagggcgtagatcccaagcaggcggcgggtattttcgatcaggtg
gcgaaattcgccggttacggctttaataaatctcacgccgcggcctatgcgctggtgtct
ttccacaccgcttatctcaaggccaattatccggtggaatttatggcggcgatcatgtcg
ctcgacctcaataacaccgataagctggcgatcttcaaacaggaagtcgtcagcctcggc
atcccgattttgccgcctgatatcaataaatctctggtggaattctcggtcgaggtggtg
ccgggcaaggcggacgaagataatgtcggcggcgcgcaaggcgacggtattctgcgcggg
gtgcgttatggtcttgcggcgctgaagaatgtcggttctggcgcgatggagcaattgatc
aaggagcgggacaagaacggcccgttcaaggatgtggctgatttctgtaaccggctcgac
accaagcatgtcaataaacgggcgctggaaaacctcgccaaggccggggcctttgacagc
atcaaccctaaccgggcccagatgctggcgtcggtcgagatgatcctgaaacaggccagc
gccgccaccgaagcccgcaacagcaatcaggtcagcctgttcggcgatgtggtcgaaccg
caggcccttgccctgccggaagcgcgggactgggaattgattgtccggctcaaccatgaa
aaagacgccattggcttttacctctcggcccatcctcttgatgcctataaagtcattctc
gagcgccagaaaatcctgccctcgaccgaactggaacgtaaagcaaagggcggcggtaca
gtgaagctcgccgggacggtgcagaccatccgggtgatgaagaacaagcgcggcaagaaa
ttcgcctttatcggcttttccgacgcctttggcggctgggaaacgatggtgttttccgaa
ctgctcgacagtgctgacgaaattttgcagatgggcagttcggtgattgccaccgtggaa
gcgagcattgatccggagcgcggcctgcgggtgacggcgaaaagctttgccgcgatcgag
gtggtggcggccaacagcgccaaggggctggagatattcctcaccgacgccagcaacatc
accgccatccgcgaaatactcgacaaccacaagggcggccggggttttgtcactttcaaa
attaaagtgaaggatgaagatgagtatgatatcgatatagaattaaaagataaatataaa
gtttcacctgacatcagaagtgcgctgatcaccatgaagggcgtgatggatgcccgggag
atttaa
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