Paremcibacter congregatus: FIV45_13760
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Entry
FIV45_13760 CDS
T06024
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ecog
Paremcibacter congregatus
Brite
KEGG Orthology (KO) [BR:
ecog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecog03016
]
FIV45_13760
Enzymes [BR:
ecog01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FIV45_13760
Transfer RNA biogenesis [BR:
ecog03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FIV45_13760
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
DNA_polI_exo1
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
QDE28252
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All DBs
Position
3108998..3109612
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AA seq
204 aa
AA seq
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MSIELHRGDLPDHVKFTGSVAIDTETMGLNPHRDRLCLIQLSSGDGTAHLVQIAQGQTKA
PNLKAMLEDHHLTKIFHYARFDVAVLNKYLGARVRPVYCTKIASRLVRTYTDRHGLKDLC
RELIGVDLSKKQQSSDWGADELSNEQREYAASDVLHLHKLMNRLNVMLDRSGRRDLAQSC
FDFLPTRTDLDLLGWPDEDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattgaactgcatcggggcgatttgccggaccatgtgaaatttaccggctccgtg
gcgatcgatacggaaaccatggggcttaacccgcaccgcgaccggctgtgcctgatccag
ctgtccagcggcgacggcaccgcccatctggtgcagatcgcccagggccagaccaaggcg
ccgaacctgaaagccatgctggaagaccatcatctgaccaagattttccattacgcccgg
tttgacgtggcggtgctcaacaaatatctcggcgcccgggtgcggccggtctattgcacc
aagatcgcctcgcgcctggtgcggacctatacggaccggcatggcctgaaagacctgtgt
cgggaactgatcggtgttgatctgtcaaagaaacagcagagttccgactggggcgctgac
gagctgtccaacgaacaacgggaatatgccgcctctgacgtgctgcatctgcataaactg
atgaaccggctgaatgtgatgctcgaccggtcgggccgccgcgacctggcccagtcctgc
tttgattttctcccgacccgcaccgatctcgatctgctcggctggccggatgaagatatc
ttcgcccatagttaa
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