Paremcibacter congregatus: FIV45_15810
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Entry
FIV45_15810 CDS
T06024
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ecog
Paremcibacter congregatus
Pathway
ecog03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIV45_15810 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecog03400
]
FIV45_15810 (xth)
Enzymes [BR:
ecog01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
FIV45_15810 (xth)
DNA repair and recombination proteins [BR:
ecog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FIV45_15810 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QDE28632
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All DBs
Position
3574005..3574802
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AA seq
265 aa
AA seq
DB search
MGRIRLVTWNINSVRARLDSVEKLVDKYNPDVICFQETKVQDHMFPGKFFHEQGYSHHAI
AGQKSYNGVAVMSRVPLLNIDRRDWCAKGDARHVEVTLPGNIQLHNFYVPAGGDEPDPAI
NDKFAHKLDFLDEMTAWSGDLPKDSRAILVGDLNIAPYESDVWSHKKLLKVVSHTPIECE
KMNTLMQAHDWFDVMRHFVPEPERLYSWWSYRARDWRAADKGRRLDHVWTSPDLKDSMTS
MAVLEDARGWNKPSDHAPVMVEITI
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaatccgactggtgacctggaacatcaacagcgtgcgcgcacgcctcgactcc
gttgaaaaactggtcgataaatataatcccgacgtgatctgttttcaggaaaccaaggtc
caggatcatatgtttccggggaaattcttccatgaacagggctatagccatcatgcgatt
gccggccagaaatcctataatggcgtggcggtgatgtcccgggtacctctgctgaatatt
gaccgccgcgactggtgcgccaagggcgacgcccgccatgtggaggtcaccctgcccggc
aatatccagctgcataatttctatgtgcccgcgggcggcgacgaacccgacccggcgatc
aatgacaaattcgcccataagctcgattttctggatgaaatgaccgcctggtccggcgac
ctgcccaaggattcccgcgccattctggtgggagatctgaacatcgccccctatgaaagc
gatgtctggtcccataaaaaactgctgaaagtggtcagccacacgccgatcgaatgtgaa
aaaatgaatactctgatgcaggcccatgactggttcgatgtcatgcgtcattttgtgccg
gaacctgaacggctctatagctggtggtcttatcgcgcccgggactggcgcgccgccgac
aagggccgacgtctggatcacgtctggaccagtccggacctgaaagacagcatgacgtca
atggccgtgttggaagacgcccgcggctggaacaaaccgtcggatcacgccccggtcatg
gtggaaatcactatttaa
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