Paremcibacter congregatus: FIV45_18255
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Entry
FIV45_18255 CDS
T06024
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ecog
Paremcibacter congregatus
Brite
KEGG Orthology (KO) [BR:
ecog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecog03016
]
FIV45_18255 (truB)
Enzymes [BR:
ecog01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FIV45_18255 (truB)
Transfer RNA biogenesis [BR:
ecog03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FIV45_18255 (truB)
Prokaryotic type
FIV45_18255 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QDE29079
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All DBs
Position
4170410..4171318
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AA seq
302 aa
AA seq
DB search
MGRKRKGNKVDGWLVIDKPLGMTSTQVVGKCRWVTKAQKIGHGGTLDPLASGILPIACGE
ATKTIPFIMDARKIYVFTVTFGESRSTDDAEGEIVATSDHRPGAADITEVLPEFIGCIQQ
IPPAYSAIKIDGKRAYDLARAGEDFEIKSRNVDIFDLKMLSLDGDQATLQVTCGKGTYVR
SLARDLALRLNTVGYVSFLRRTAVGPFDLAKSISLEKLEELGHSAPPEDWILPVVTVLDD
ILALAVTEEQATLLSHGQALSVSGPIESGIVRAMAGERLVALCETDQNPDMTILRPVRVF
NF
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
ttggggcggaagcgtaaaggcaacaaggttgacggctggctggtgatagacaagccgctc
ggcatgacctcgacccaggtggttggcaaatgccgctgggttaccaaggctcagaaaatt
ggccatggcggcacgctggacccgttggcgtccggcattctgccgattgcatgtggtgaa
gcaacaaagaccattcccttcattatggatgcccgcaagatctatgtcttcaccgtgacg
tttggtgaatcccgcagcacagatgatgcggaaggtgaaattgttgcgacctctgatcat
cgtccgggcgcggcggatatcacagaagttctgccggaatttatcgggtgcattcaacaa
ataccaccagcctattccgcgatcaagatcgacggaaaaagggcctatgatctggcccgg
gcgggcgaagattttgagataaaatcccgcaacgtggatatatttgatttaaaaatgctg
tcattagacggcgatcaggcaacccttcaggtaacctgcggcaagggcacctatgtgcgt
tcgctggcccgtgatttggctcttcggctgaacacggtgggttatgtctcttttctccgg
cgaacggctgtcgggccttttgatttggccaagtcgatttcactggaaaagttagaggaa
ttgggccatagtgcgccgcctgaggattggattctccctgtagtgaccgtgctggacgac
atcttggcactggccgttacagaagaacaagcgacgctcctgtctcatggacaggcgctg
agtgtctcaggcccgatcgaatcggggattgtcagggctatggccggcgaacgccttgtg
gcgttatgcgaaacggaccagaatccagatatgacaattctcaggccggtgcgggttttt
aatttttaa
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