Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0151
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Entry
ECRM13516_0151 CDS
T03011
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECRM13516_0151 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecoh03019
]
ECRM13516_0151 (pcnB)
Enzymes [BR:
ecoh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ECRM13516_0151 (pcnB)
Messenger RNA biogenesis [BR:
ecoh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ECRM13516_0151 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
AHG12847
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All DBs
Position
complement(164875..166239)
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AA seq
454 aa
AA seq
DB search
MLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRD
LLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNV
SDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGV
IRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESL
KLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMR
VNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTR
DIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAP
PDQKGMLNELDEEPSPRRRTRRPRKRAPRREGTA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgctaagccgcgaggaaagcgaggctgaacaggcagtcgcccgtccacaggtgacggtg
atcccgcgtgagcagcatgctatttctcgcaaagatatcagtgaaaatgccctgaaggta
atgtacaggctcaataaagcgggatacgaagcctggctggttggcggcggcgtgcgcgac
ctgttactcggcaaaaagccgaaagattttgacgtaaccactaacgccacgcctgagcag
gtgcgcaaactgttccgtaactgccgcctggtgggtcgccgtttccgtctggctcatgtg
atgtttggcccggagattatcgaagttgcgaccttccgtggacaccacgaaggtaacgtc
agcgaccgcacgacctcccaacgcgggcaaaacggcatgttgctgcgcgacaacattttc
ggctccatcgaagaagacgcccagcgccgcgatttcactatcaacagcctgtattacagc
gtagcggattttaccgtccgtgattacgttggcggtatgaaggatctgaaggacggtgtt
atccgtctgattggtaacccggaaacgcgctaccgtgaagatccggtacgtatgctgcgc
gcagtacgttttgccgccaaattgggtatgcgcatcagcccggaaaccgcagaaccgatc
cctcgcctcgctaccctgctgaacgatatcccaccggcacgcctgtttgaagaatcgctt
aaactgctacaagcgggctacggttacgaaacctataaactgctgtgtgaatatcatctg
ttccagccactgttcccgaccattacccgttacttcacggaaaatggcgacagcccgatg
gagcggatcattgaacaggtgctgaagaataccgatacgcgtatccataacgatatgcgc
gtgaacccggcgttcctgtttgccgccatgttctggtacccactgctggagacggcacag
aagatcgcccaagaaagcggcctgacctatcacgacgctttcgcgctggcgatgaacgac
gtgctggacgaagcctgccgttcactggcaatcccgaaacgtctgacgacgttaacccgc
gatatctggcagttgcagttgcgtatgtcccgacgtcagggtaaacgcgcatggaaactg
ctggagcatcctaagttccgtgcggcttatgacctgttggccttgcgagctgaagttgag
cgtaacgctgaactgcagcgtctggtgaaatggtggggtgagttccaggtttccgcgcca
ccagaccaaaaagggatgctcaacgagctggatgaagaaccgtcaccgcgtcgtcgtact
cgtcgtccacgcaaacgcgcaccacgtcgtgagggtaccgcatga
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