Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0289
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Entry
ECRM13516_0289 CDS
T03011
Symbol
betI
Name
(GenBank) HTH-type transcriptional regulator BetI
KO
K02167
TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoh03000
]
ECRM13516_0289 (betI)
Transcription factors [BR:
ecoh03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
ECRM13516_0289 (betI)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_6
TetR_N
LacI
DUF1744
LutB_C
HTH_3
TetR_C_28
TetR_C_31
Motif
Other DBs
NCBI-ProteinID:
AHG12977
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All DBs
Position
complement(306285..306872)
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AA seq
195 aa
AA seq
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MPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFRDKNGLLEAT
MRDITSQLRDAVLNRLHALPQGSAEQRLQAIVGGNFDETQVSSAAMKAWLAFWASSMHQP
MLYRLQQVSSRRLLSNLVSEFRRELPRHQAQEAGYGLAALIDGLWLRAALSGKPLDKPLA
HSLTRHFITQHLPTD
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaattggggatgcagtcgatccggcgcagacaactgatcgacgccacactggaa
gcaataaatgaagtgggcatgcacgatgcaacgatcgcgcagatcgcccgccgtgcaggc
gtttctacggggatcatcagccactatttcagggacaaaaatggtctgctggaagcaacc
atgcgcgatatcaccagtcagctgcgtgacgcggttttgaatcgattacatgcacttccg
cagggcagtgcagagcagcgattacaggcgattgttggcggaaacttcgatgaaacgcag
gtgagcagtgcggcgatgaaagcctggctggcgttctgggccagcagtatgcatcagccg
atgctctatcgtttacagcaggtcagcagccgccgcttgctgtcgaatctggtgagcgag
tttcgccgcgaattgccgcgccaccaggcacaggaagcgggctacggccttgccgcgctg
attgacggattatggctgcgcgcggcactgagcggcaaaccgctggataaacctctcgca
cactcgctgacccgtcactttattactcagcatttacccaccgattaa
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