Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0390
Help
Entry
ECRM13516_0390 CDS
T03011
Symbol
secD
Name
(GenBank) Protein-export membrane protein SecD
KO
K03072
preprotein translocase subunit SecD
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh03060
Protein export
ecoh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ECRM13516_0390 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ECRM13516_0390 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ecoh02044
]
ECRM13516_0390 (secD)
Secretion system [BR:
ecoh02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ECRM13516_0390 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD-TM1
SecD_1st
SecD_SecF
MMPL
Sec_GG
Patched
Motif
Other DBs
NCBI-ProteinID:
AHG13078
LinkDB
All DBs
Position
415381..417195
Genome browser
AA seq
604 aa
AA seq
DB search
MLIVVIVIGLLYALPNLFGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEE
GAILARFDSTDTQLRAREALMGVMGDKYVVALNLAPATPRWLAAIHAEPMKLGLDLRGGV
HFLMEVDMDTALGKLQEQNIDSLRSDLREKGIPYTTVRKENNYGLSITFRDAKARDEAIA
YLSKRHPDLVISSQGSNQLRAVMSDARLSEAREYAVQQNINILRNRVNQLGVAEPVVQRQ
GADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQ
PVVLYKRVILTGDHITDSTSSQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVE
YKDSGKKDANGRAVLVKQEEVINIANIQSRLGNSFRITGINNPNEARQLSLLLRAGALIA
PIQIVEERTIGPTLGMQNIEQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIV
GIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFS
SIFDANITTLIKVIILYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVK
KLSI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgtggtgattgtcatcggtctgctgtatgcgcttcccaacctgtttggtgag
gatccggctgttcagatcactggtgcgcgcggagtcgccgccagtgagcaaacgctgatc
caggtccagaaaacgttacaagaagaaaaaataactgctaagtctgtggcactggaagag
ggcgctattcttgcgcgcttcgactccactgacacccagctgcgcgctcgtgaagcatta
atgggcgttatgggtgacaaatacgtcgtggcgcttaaccttgccccggcaacgccgcgc
tggctggcagctattcacgctgagccgatgaagctcggccttgacctgcgtggcggcgtt
cacttcctgatggaagtggatatggacaccgcgcttggcaaactccaggaacaaaatatc
gatagcctgcgcagcgacctgcgcgaaaaaggcatcccgtataccaccgttcgtaaagaa
aacaactacggcctgagcatcactttccgcgatgctaaagctcgtgatgaagccattgcg
tatctgagcaagcgccatccggacctggtgattagtagccagggcagcaaccagctgcgt
gcggtaatgagcgatgctcgtctgagtgaagcgcgtgaatatgcggtgcagcagaacatc
aatatcctgcgtaaccgtgtaaaccaacttggcgtggcggagccggtggttcagcgtcag
ggtgctgaccgtatcgttgttgaactgccaggtattcaggacactgcgcgtgcgaaagag
attctgggtgcgacggcaacgctggaattccgtctggtaaacaccaacgttgatcaggcc
gctgcggcatccggtcgcgtaccgggcgactctgaagtgaaacagacccgcgaaggtcag
ccggttgtgctgtacaaacgcgtaattctgaccggtgaccatatcaccgactccacttcc
agccaggacgaatacaaccagccgcaggttaacatctcgctcgatagcgctggtggcaac
attatgtctaacttcaccaaggacaacatcggcaaaccgatggcaaccctgtttgtggag
tacaaagacagcggtaagaaagatgcaaatggtcgtgcggttctggtgaaacaggaagag
gtgattaacatcgccaacatccagtctcgtctgggtaacagcttccgtatcaccggcatc
aacaacccgaacgaagcccgtcagctgtcactgctgctgcgtgccggtgcgttgatcgcg
ccgattcagattgttgaagaacgtacaattggcccgaccctgggtatgcagaacattgag
caggggctggaggcttgccttgccggtctgctggtttctattctgttcatgatcatcttc
tataagaagtttggtctgattgcgaccagtgctctgattgccaacttgatcttgatcgtc
ggtattatgtcgctgttgccaggcgcaacactgagtatgccaggtatcgcgggtatcgtc
ttaacccttgcggtagcggtcgatgcgaacgtactgatcaacgaacgtattaaagaagag
ttgagcaacggacgtactgttcaacaggcaattgatgaaggttatcgtggcgcattcagt
tctatcttcgatgcgaacatcaccacgctgattaaagtcatcatcctgtacgcagtgggt
accggggcaattaaagggttcgcgattactaccggtatcggtgtggcgacgtcgatgttt
accgcgattgtcggtacgcgtgccatcgtaaacctgctatatggcggcaagcgcgtcaag
aagctgtcaatctga
DBGET
integrated database retrieval system
