Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0393
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Entry
ECRM13516_0393 CDS
T03011
Symbol
tsx
Name
(GenBank) Nucleoside-specific channel-forming protein Tsx precursor
KO
K05517
nucleoside-specific channel-forming protein
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecoh02000
]
ECRM13516_0393 (tsx)
Transporters [BR:
ecoh02000
]
Other transporters
Pores ion channels [TC:
1
]
ECRM13516_0393 (tsx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Channel_Tsx
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
AHG13081
LinkDB
All DBs
Position
complement(418830..419714)
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AA seq
294 aa
AA seq
DB search
MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGSYHTRFGPQIRNDTYLE
YEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEIEPRFSIDKLTNTDLSFGP
FKEWYFANNYIYDMGRNKDGRQSTWYMGLGTDIDTGLPMSLSMNVYAKYQWQNYGAANEN
EWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLGDDSGNAINGIKTRTNNSIASSH
ILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGNFNVRSTGWGGYLVVGYNF
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacattactggcagccggtgcggtactggcgctctcttcgtcttttactgtc
aacgcagctgaaaacgacaaaccgcagtatctttccgactggtggcaccagagcgttaac
gttgtcggaagctatcacacccgtttcggaccgcagatccgcaacgatacctaccttgag
tacgaagcattcgctaaaaaagactggttcgacttctatggttatgcggatgcgccggta
ttcttcggcggtaactccgatgcaaaaggtatctggaaccacggttctccgctgtttatg
gaaatcgaaccacgtttctccatcgacaagctgaccaatactgaccttagcttcggtccg
ttcaaagagtggtacttcgcgaacaactacatttacgacatgggtcgtaataaagatggt
cgccagagcacctggtacatgggtctgggtaccgatatcgacactggcctgccgatgagc
ctgtccatgaacgtctatgcgaaataccagtggcagaactatggcgcagcgaacgaaaac
gagtgggacggttaccgtttcaaaattaaatactttgtgccgattaccgatctgtggggc
ggtcagctgagctacatcggcttcaccaacttcgactggggttccgatttaggggatgac
agcggtaacgcaatcaacggtattaagacccgtactaataactctatcgcttccagccat
attctggctctgaactacgatcactggcactactctgtcgtagctcgttactggcacgac
ggtggtcagtggaacgacgatgcagaactgaacttcggcaacggcaacttcaacgttcgc
tctaccggctggggtggttacctggtagtaggttacaacttctga
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