Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0839
Help
Entry
ECRM13516_0839 CDS
T03011
Symbol
ybiN
Name
(GenBank) Ribosomal RNA large subunit methyltransferase F
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecoh03009
]
ECRM13516_0839 (ybiN)
Enzymes [BR:
ecoh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
ECRM13516_0839 (ybiN)
Ribosome biogenesis [BR:
ecoh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ECRM13516_0839 (ybiN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_23
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
AHG13513
LinkDB
All DBs
Position
868834..869760
Genome browser
AA seq
308 aa
AA seq
DB search
MSAQKPGLHPRNRHHSRYDLATLCQVNPELKQFLTLTPAGEQSVDFANPLAVKALNKALL
AHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANASILDIGVGANCIYPL
IGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLRRQKESGAIFNGIIHKNEQYD
ATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEES
KGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFMNDEQR
RRFVNRQR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccagaaaccggggttgcatccgcgcaaccgtcatcacagccgctacgatctc
gccacgctttgtcaggtcaatcctgaactcaagcaattcctcacgcttacacccgccggg
gagcaaagcgtagactttgccaatccgctggcggtgaaggcgctcaataaggcgttgctg
gcccatttttacgccgtagcgaactgggatatcccggacggttttctctgcccgccagta
ccgggccgggcggattatattcatcaccttgccgatttactggctgaagcaagcggaaca
attccagctaatgccagcattcttgatatcggcgttggtgcgaactgtatttatccgctg
attggcgtacatgaatatggctggcgttttaccggtagtgaaaccagcagccaggcgtta
agcagcgcgcaggcgatcatcagtgctaatccggggcttaatcgcgccattcgtctgcgt
cggcaaaaagagagtggggcgatttttaacggcatcatccataaaaacgagcaatacgac
gcgaccttgtgtaacccgccattccacgattctgccgctgcggcgcgggcaggtagtgag
cgtaaacgccgtaacctggggctgaacaaagacgatgcactgaactttggtggccagcaa
caggagttgtggtgtgaaggcggtgaagtcacctttatcaaaaagatgattgaagagagc
aaaggcttcgcgaagcaggtgatgtggtttacttcactggtatctcgtggtgaaaactta
ccgccgttgtatcgtgctctgacggacgtgggcgcggtgaaggtggttaaaaaagagatg
gcccaggggcaaaagcagagtcgctttattgcctggacctttatgaacgacgagcagcgc
cgccgttttgttaatcgccaacgttaa
DBGET
integrated database retrieval system
