Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0926
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Entry
ECRM13516_0926 CDS
T03011
Symbol
cydC
Name
(GenBank) Transport ATP-binding protein CydC
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ECRM13516_0926 (cydC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecoh02000
]
ECRM13516_0926 (cydC)
Transporters [BR:
ecoh02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
ECRM13516_0926 (cydC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_22
DUF87
NACHT
AAA_16
FtsK_SpoIIIE
MMR_HSR1
AAA_29
RsgA_GTPase
AAA_23
Rad17
AAA_30
AAA_5
AAA_25
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AHG13599
LinkDB
All DBs
Position
complement(960901..962622)
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AA seq
573 aa
AA seq
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MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYM
LPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELL
NRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGSIMLLTLFLMPPL
FYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQ
SELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGA
FQHLGQVIASAVRISDLTDQKPEVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGIS
LQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVP
QRVHLFSATLRDNLLLASPGSSDEALSEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGEL
RRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMREKTVLMVTHRLRGLSRFQ
QIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctttgctaccctatctggcactgtataaacgtcataaatggatgttaagtctt
ggtattgtgctggcaattgtgacgctgctcgccagtatcggtctgttgacactttccggc
tggttcctctcggcctcagcggttgcgggggttgccggactgtacagcttcaactatatg
ctacccgctgcgggcgtgcgtggtgccgcaatcacccgtactgccgggcgttattttgaa
cgtctggtaagtcacgacgcgactttccgcgtgttgcagcatctgcgcatttacaccttc
agcaaattgttgcccctctcccctgccggactggcgcgctatcgtcagggcgaattgctc
aaccgcgtggtggcggatgttgatacgctcgatcatctttacctgcgcgttatctcgccg
ctggtgggcgcttttgtggtgattatggtggtgacaatcgggttaagtttccttgatttc
accctcgcctttacgctgggcagcattatgttactgacgcttttcctgatgccaccgctg
ttttatcgtgcgggaaaaagcaccgggcaaaatctgactcatcttcgcggacagtatcgc
caacaactgacggcctggctgcaagggcaagctgagctgaccatttttggtgccagcgat
cgttatcgcacgcaactagagaatacagaaattcaatggctggaagcgcaacgccgtcaa
tctgaactgaccgcattgtcgcaagcgataatgctgctcattggcgcgttagcggtgatc
ctgatgctgtggatggcgtctggcggcgttggcggcaatgctcaacccggcgcgttaatt
gccctgtttgtcttttgtgcgttagccgcgtttgaagcactggcaccagtaacgggtgca
tttcagcatctggggcaagtcattgcctctgccgtacgtatctctgacttaacggatcaa
aaaccggaggtcaccttccctgatacccaaactcgtgttgccgatcgcgtttcgctgaca
ttacgggatgttcagttcacttatccggagcaatcccaacaggcacttaaagggatttct
cttcaggtaaacgccggggaacatatagcgattctcgggcgaaccggatgcggcaaatca
acactgttacaactgctgacccgcgcatgggacccgcaacagggcgagattttgcttaac
gatagccccatagccagcctgaatgaagcggctctacgacagaccatcagcgttgttcct
cagcgagtgcatctgtttagcgccacgctgcgtgataatctgttactcgcctcgcctggc
agtagtgatgaggctctgtcggagatcttgcgtcgcgttggtctggagaagctgctcgag
gatgcaggtctcaacagttggttaggtgaaggcggacgccagctctccggtggtgaactg
cgccgtctggctatcgcccgtgcgctgttacatgatgcgccactggtgttgctggatgaa
cctaccgaaggcttagatgccacaaccgaaagccagatccttgaattgcttgcagaaatg
atgcgtgagaaaacggtgttaatggtcacccatcgacttcgcggactctctcgtttccaa
caaataatagtgatggacaacgggcaaattattgagcaaggtactcacgcagaactgctt
gccagacaggggcgttattaccagttcaagcagggtttgtaa
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