Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0933
Help
Entry
ECRM13516_0933 CDS
T03011
Symbol
ycaJ
Name
(GenBank) Holliday junction DNA helicase
KO
K07478
putative ATPase
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
ECRM13516_0933 (ycaJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
AAA_16
Mg_chelatase
nSTAND3
AAA_22
AAA_19
Sigma54_activat
AAA_30
AAA_14
AAA_3
RNA_helicase
AAA_2
ABC_tran
DUF815
Sigma54_activ_2
AAA_28
ATP-synt_ab
AAA_24
Cdc6_lid
AAA_11
AAA_18
RCF1-5-like_lid
AAA_33
DNA_pol3_delta2
AAA_25
NACHT
IstB_IS21
Resolvase
NPHP3_N
NTPase_1
TsaE
Parvo_NS1
AAA_17
TIP49
UvrD-helicase
cobW
DUF5906
HisZ-like
Motif
Other DBs
NCBI-ProteinID:
AHG13606
LinkDB
All DBs
Position
971338..972681
Genome browser
AA seq
447 aa
AA seq
DB search
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG
TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK
SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED
KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI
AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS
EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA
RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN
RGLEGKIGEKLAWLAEQDQNSPIKRYR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaatctgtcgctcgatttttcggataatacttttcaacctctggccgcgcgtatg
cggccagaaaatttagcacagtatatcggtcagcaacatttgctggctgcggggaagccg
ttgccgcgcgctatcgaagccgggcatttacattctatgatcctctgggggccaccgggt
accggcaaaacaaccctcgctgaagtgattgcccgctatgcgaacgctgatgtggaacgt
atttctgccgtcacctctggcgtgaaagagattcgcgaggcgatcgagcgcgcccggcaa
aaccgcaatgcaggtcgccgcactattctttttgttgacgaagttcaccgtttcaacaaa
agccagcaggatgcatttctgccacatattgaagacggcaccatcacttttattggcgca
accactgaaaacccgtcgtttgagcttaattcggcactgctttcccgtgcccgtgtttat
ctgttgaaatccctgagtacagaggatattgagcaagtactaactcaggcgatggaagac
aaaacccgtggctatggtggtcaggatattgttctgccagatgaaacacgacgtgccatt
gcagaactggtgaatggcgacgcgcgccgggcgttaaatacgctggaaatgatggcggat
atggccgaagtcgatgatagcggtaagcgggtcctgaagcctgaattactgaccgaaatc
gccggtgaacgtagcgcccgctttgataacaaaggcgatcgcttttacgatctgatttcc
gcactgcataagtcggtacgtggtagcgcacccgatgcggcgctgtactggtatgcgcga
attattaccgctggtggcgatccgttatatgtcgcgcgtcgctgtctggcgattgcgtct
gaagacgtcggtaatgccgatccacgggcgatgcaggtggcaattgcggcctgggattgc
tttactcgcgttggcccggcggaaggtgaacgcgccattgctcaggcgattgtttacctg
gcctgcgcgccaaaaagcaacgctgtctacactgcgtttaaagccgcgctggccgatgct
cgcgaacgcccggattatgacgtgccggttcatttgcgtaatgcgccgacgaaattaatg
aaggaaatgggctacgggcaggaatatcgttacgctcatgatgaagcaaacgcttatgct
gccggtgaggtttacttcccgccggaaatagcacaaacacgctattatttcccgacaaac
aggggccttgaaggcaagattggcgaaaagctcgcctggctggctgaacaggatcaaaat
agccccataaaacgctaccgttaa
DBGET
integrated database retrieval system
