Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0952
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Entry
ECRM13516_0952 CDS
T03011
Symbol
ihfB
Name
(GenBank) Integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecoh03032
]
ECRM13516_0952 (ihfB)
03036 Chromosome and associated proteins [BR:
ecoh03036
]
ECRM13516_0952 (ihfB)
03400 DNA repair and recombination proteins [BR:
ecoh03400
]
ECRM13516_0952 (ihfB)
DNA replication proteins [BR:
ecoh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ECRM13516_0952 (ihfB)
Chromosome and associated proteins [BR:
ecoh03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ECRM13516_0952 (ihfB)
DNA repair and recombination proteins [BR:
ecoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ECRM13516_0952 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_euk_1
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
AHG13625
LinkDB
All DBs
Position
995703..995987
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AA seq
94 aa
AA seq
DB search
MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaattgatagaaagacttgccacccagcaatcgcacattcccgccaag
acggttgaagatgcagtaaaagagatgctggagcatatggcctcgactcttgcgcagggc
gagcgtattgaaatccgcggtttcggcagtttctctttgcactaccgcgcaccacgtacc
ggacgtaatccgaagactggcgataaagtagaactggaaggaaaatacgttcctcacttt
aaacctggtaaagaactgcgcgatcgcgccaatatttacggttaa
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